DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE10 and Gstz1

DIOPT Version :9

Sequence 1:NP_001286570.1 Gene:GstE10 / 37105 FlyBaseID:FBgn0063499 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001102915.1 Gene:Gstz1 / 681913 RGDID:1589363 Length:216 Species:Rattus norvegicus


Alignment Length:189 Identity:45/189 - (23%)
Similarity:79/189 - (41%) Gaps:14/189 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILYGTESSPPVRAVLLTLRALQLDHEFHTLDM--QAGDHLKPDMLRKNPQHTVPMLEDGESCIWD 67
            :||....|.....|.:.|....:|:|...:::  ..|.....:....||...||.|:.....|..
  Rat     7 VLYSYFRSSCSWRVRIALALKGIDYEIVPINLIKDGGQQFSEEFQTLNPMKQVPALKIDGITIGQ 71

  Fly    68 SHAIIGYLVNKYAQSDELYPKDPLKRAVVDQRLHFETGVLFHGIFKQLQRALFKE--NATEVPKD 130
            |.||:.|| .:......|.|:||.|||:|    ...:.::..||......::.|:  ...::|..
  Rat    72 SLAILEYL-EETRPIPRLLPQDPQKRAIV----RMISDLIASGIQPLQNLSVLKQVGQENQMPWA 131

  Fly   131 RLAELKDAYALLEQFL--AENPYVAGPQLTIADFSIVATVSTLHLSYCPVDATKYPKLS 187
            :.| :...:..||:.|  ....|..|.::::||..:...|:  :.....||.:.||.:|
  Rat   132 QKA-ITSGFNALEKILQSTAGKYCVGDEVSMADVCLAPQVA--NAERFKVDLSPYPTIS 187

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstE10NP_001286570.1 GstA 4..197 CDD:223698 45/189 (24%)
GST_N_Delta_Epsilon 4..77 CDD:239343 19/73 (26%)
GST_C_Delta_Epsilon 91..211 CDD:198287 22/101 (22%)
Gstz1NP_001102915.1 GST_N_Zeta 6..80 CDD:239340 19/73 (26%)
maiA 7..211 CDD:273527 45/189 (24%)
Glutathione binding. /evidence=ECO:0000250 14..19 1/4 (25%)