DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE10 and Gstt3

DIOPT Version :9

Sequence 1:NP_001286570.1 Gene:GstE10 / 37105 FlyBaseID:FBgn0063499 Length:240 Species:Drosophila melanogaster
Sequence 2:XP_038954940.1 Gene:Gstt3 / 499422 RGDID:1562732 Length:298 Species:Rattus norvegicus


Alignment Length:209 Identity:65/209 - (31%)
Similarity:99/209 - (47%) Gaps:28/209 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LILYGTESSPPVRAVLLTLRALQLDHEFHTLDMQAGDHLKPDMLRKNPQHTVPMLEDGESCIWDS 68
            |.||....|.|.|||.:..:...:..:..|:::..|.|......:.||...||.|:||:..:.:|
  Rat    60 LELYLDLMSQPCRAVYIFAKKNGIPFQLRTIELLKGQHYTDAFAQVNPLRKVPALKDGDFVLAES 124

  Fly    69 HAIIGYLVNKYAQSDELYPKDPLKRAVVDQRLHFETGVLFHGIFKQ-LQRALFKEN------ATE 126
            .||:.||..||...|..||:|...||.||:.|.::     |...:. ..||::::.      ...
  Rat   125 VAILLYLSRKYKAPDHWYPQDLQTRARVDEYLAWQ-----HTALRSCCSRAMWQKMMFPVFLGQP 184

  Fly   127 VPKDR----LAELKDAYALLE-QFLAENPYVAGPQLTIADFSIVATVSTLHLSYCPVDA-----T 181
            ||.:|    ||||.....:|| :||....::.||.:::||  :||....:|    ||.|     .
  Rat   185 VPPERLASTLAELDGCLQMLEDKFLQNKAFLTGPHISVAD--LVAITELMH----PVSAGCKIFE 243

  Fly   182 KYPKLSAWLARISA 195
            ..|||:||..|:.|
  Rat   244 SRPKLAAWRQRVEA 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE10NP_001286570.1 GstA 4..197 CDD:223698 65/209 (31%)
GST_N_Delta_Epsilon 4..77 CDD:239343 23/72 (32%)
GST_C_Delta_Epsilon 91..211 CDD:198287 36/122 (30%)
Gstt3XP_038954940.1 GST_N_Theta 60..135 CDD:239348 23/74 (31%)
GST_C_Theta 149..273 CDD:198292 36/120 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348134
Domainoid 1 1.000 62 1.000 Domainoid score I10049
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1231780at2759
OrthoFinder 1 1.000 - - FOG0000035
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100130
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X30
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.650

Return to query results.
Submit another query.