DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE10 and Gdap1

DIOPT Version :9

Sequence 1:NP_001286570.1 Gene:GstE10 / 37105 FlyBaseID:FBgn0063499 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001101367.1 Gene:Gdap1 / 312890 RGDID:1309005 Length:358 Species:Rattus norvegicus


Alignment Length:264 Identity:59/264 - (22%)
Similarity:91/264 - (34%) Gaps:80/264 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LILYGTESSPPVRAVLLTLRALQLDHEFHTLDMQAGDHLKPDMLRKNPQHTVPMLEDGESCIWDS 68
            ||||....|...:.|.|.:....|..|.|.:.:...:|.:|..:|.|....||:|..||:.|.::
  Rat    26 LILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICEA 90

  Fly    69 HAIIGYLVNKYAQS-------DE---LYPKDPLKRAVVDQR----------LHFETGV------- 106
            ..||.||...:...       ||   .||:....|.::|..          ||.|..|       
  Rat    91 TQIIDYLEQTFLDERTPRLMPDEGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAY 155

  Fly   107 ---LFHGIFKQLQRALFKENATEVPKDRLAELKDAY----------------------------A 140
               ...|.....:..| |:.|.|.|     :|::||                            .
  Rat   156 ATTRIRGQIGNTESEL-KKLAEENP-----DLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEK 214

  Fly   141 LLEQFLAE-------------NPYVAGPQLTIADFSIVATVSTL-HLSYCPVD--ATKYPKLSAW 189
            :|:|...|             .|::.|...|:||.|:..|:..| .|.:...:  ..|.|.|.::
  Rat   215 VLDQVETELQRRNEETPDEGNQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGHGKRPNLESY 279

  Fly   190 LARI 193
            ..|:
  Rat   280 YERV 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE10NP_001286570.1 GstA 4..197 CDD:223698 59/264 (22%)
GST_N_Delta_Epsilon 4..77 CDD:239343 24/72 (33%)
GST_C_Delta_Epsilon 91..211 CDD:198287 31/167 (19%)
Gdap1NP_001101367.1 GstA 26..292 CDD:223698 59/264 (22%)
GST_N_GDAP1 26..98 CDD:239350 23/71 (32%)
GST_C_GDAP1 179..289 CDD:198336 20/110 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348310
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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