DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE10 and Gsto2

DIOPT Version :9

Sequence 1:NP_001286570.1 Gene:GstE10 / 37105 FlyBaseID:FBgn0063499 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001012071.1 Gene:Gsto2 / 309465 RGDID:1310764 Length:248 Species:Rattus norvegicus


Alignment Length:197 Identity:45/197 - (22%)
Similarity:81/197 - (41%) Gaps:16/197 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYGTESSPPVRAVLLTLRALQLDHEFHTLDMQAGDHLKPD-MLRKNPQHTVPMLEDGE-SCIWDS 68
            :|.....|......|.|:|..:.||...::::.    ||| ...|:|...||:||:.: ..|::|
  Rat    26 IYSMRFCPYSHRTRLVLKAKSIRHEIININLKN----KPDWYYTKHPFGQVPVLENSQCQLIYES 86

  Fly    69 HAIIGYLVNKYAQSDELYPKDPLKRAVVDQRLHFETGVLFHGIFKQLQRALFKENATEVPKDRLA 133
            .....||.:.: ...:|:|.||.:||  .|::..|   ||..:.:..:..|..........|...
  Rat    87 VIACEYLDDVF-PGRKLFPYDPYERA--RQKMLLE---LFCKVPQLSKECLVALRCGRDCTDLKV 145

  Fly   134 ELKDAYALLEQFL--AENPYVAGPQLTIADFSIVATVSTLHLSYCPVDATKY-PKLSAWLARISA 195
            .|:.....||:.|  ....:..|..:::.|:.:......|.: |...|...: |.|..|::.:..
  Rat   146 ALRQELCNLEEILEYQNTTFFGGDSISMIDYLVWPWFERLDV-YGLADCVNHTPMLRLWISSMKQ 209

  Fly   196 LP 197
            .|
  Rat   210 DP 211

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstE10NP_001286570.1 GstA 4..197 CDD:223698 44/195 (23%)
GST_N_Delta_Epsilon 4..77 CDD:239343 20/72 (28%)
GST_C_Delta_Epsilon 91..211 CDD:198287 21/110 (19%)
Gsto2NP_001012071.1 GST_N_Omega 7..94 CDD:239353 19/71 (27%)