DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE10 and Vars1

DIOPT Version :9

Sequence 1:NP_001286570.1 Gene:GstE10 / 37105 FlyBaseID:FBgn0063499 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_445744.1 Gene:Vars1 / 25009 RGDID:3950 Length:1264 Species:Rattus norvegicus


Alignment Length:193 Identity:43/193 - (22%)
Similarity:70/193 - (36%) Gaps:45/193 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILYGT---ESSPPVRAVLLTLRALQLDHEFHTLDMQAGD-------H----LKPDMLRKN--PQH 53
            |||.:   ::.|.:||::.....            :|||       |    |:|....:.  |..
  Rat     3 ILYVSPHPDAFPSLRALIAARYG------------EAGDGPGWGGPHPRICLQPPPSSRTPFPPP 55

  Fly    54 TVPMLEDGESCIWDSHAIIGYLVNKYAQSDELYPK------DPLKRAVVDQRLHFETGVLFHGIF 112
            .:|.||.|...:|        :....|.:..|:|.      ......:|.|.:.:....|.....
  Rat    56 RLPALEQGPGGLW--------VWGAPAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELTPAAC 112

  Fly   113 KQLQRALFKENATEVPKDRLAELKDAYALLEQFLAENPYVAGPQLTIADFSIVATVSTLHLSY 175
            .....||......:.|:..|..|..|...||::|..:.|:||...|:||   :|.|:.|.|.:
  Rat   113 GATLPALGLRGPGQDPQAALGALGKALNPLEEWLRLHTYLAGDAPTLAD---LAAVTALLLPF 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE10NP_001286570.1 GstA 4..197 CDD:223698 43/193 (22%)
GST_N_Delta_Epsilon 4..77 CDD:239343 18/87 (21%)
GST_C_Delta_Epsilon 91..211 CDD:198287 22/85 (26%)
Vars1NP_445744.1 GstA <56..203 CDD:223698 30/128 (23%)
GST_C_family 92..213 CDD:295467 22/84 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..296
PTZ00419 282..1264 CDD:240411
ValRS_core 335..938 CDD:185677
'HIGH' region 344..354
tRNA-synt_1_2 513..640 CDD:290334
'KMSKS' region 862..866
Anticodon_Ia_Val 938..1075 CDD:153416
Val_tRNA-synt_C 1196..1258 CDD:287436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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