DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE10 and gdap1

DIOPT Version :10

Sequence 1:NP_611322.1 Gene:GstE10 / 37105 FlyBaseID:FBgn0063499 Length:240 Species:Drosophila melanogaster
Sequence 2:XP_002937122.2 Gene:gdap1 / 100490264 XenbaseID:XB-GENE-978242 Length:350 Species:Xenopus tropicalis


Alignment Length:233 Identity:56/233 - (24%)
Similarity:94/233 - (40%) Gaps:50/233 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LILYGTESSPPVRAVLLTLRALQLDHEFHTLDMQAGDHLKPDMLRKNPQHTVPMLEDGESCIWDS 68
            ||||....|...:.|.|.:....|..|.|.:.:...:|.:|..:|.||...||:|..||:.|.::
 Frog    19 LILYHWTHSFSSQKVRLVIAEKSLKCEEHDVSLPLSEHNEPWFMRLNPSGEVPVLVHGENIICEA 83

  Fly    69 HAIIGYLVNKYAQSDELYPKDPLKRAVVDQRLHFETGVLFHGIFKQLQRALFKENATEVPKDRLA 133
            ..|..||...:.  ||..|           ||..|.|.::   :.::|.  ::|....:|     
 Frog    84 TQITDYLEQTFI--DEKTP-----------RLIPEEGSMY---YPRVQH--YRELLDSLP----- 125

  Fly   134 ELKDAYALLEQFLAENPYVAGPQLTIADFSIVATVSTLHL--------SYCPVDATKYPKL-SAW 189
              .|||.        :..:..|:||:.  |::...:|..:        |.....|.:.|.| .|:
 Frog   126 --MDAYT--------HGCILHPELTVD--SMIPAYATSRIRTQIGSTESELKKLAQENPDLEDAY 178

  Fly   190 LARISAL--PFYEEDNLRGARLLADKIRSKLPKQFDKL 225
            :|:...|  ...:.||::    ...||..:|.|..|::
 Frog   179 IAKQKRLKTKLQDHDNIK----FLKKILEELEKVLDQV 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE10NP_611322.1 GST_N_Delta_Epsilon 4..77 CDD:239343 24/72 (33%)
GST_C_Delta_Epsilon 91..211 CDD:198287 24/130 (18%)
gdap1XP_002937122.2 GST_N_GDAP1 19..91 CDD:239350 23/71 (32%)
GST_C_GDAP1 172..282 CDD:198336 12/45 (27%)

Return to query results.
Submit another query.