DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf5 and RGD1309110

DIOPT Version :9

Sequence 1:NP_611321.3 Gene:Idgf5 / 37104 FlyBaseID:FBgn0064237 Length:444 Species:Drosophila melanogaster
Sequence 2:XP_006233175.1 Gene:RGD1309110 / 295352 RGDID:1309110 Length:440 Species:Rattus norvegicus


Alignment Length:462 Identity:115/462 - (24%)
Similarity:195/462 - (42%) Gaps:117/462 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGLLLCSFLAFFQSTYAEVGKLVCFYDAQSFVREGPAQMSLAELEPALQFCNFLVYGYAGI---- 70
            |.|||...|   .|.|    :|:|:::.....:.....|.|.:::|.|  |..|:|.:|||    
  Rat    27 LNLLLNVQL---DSAY----QLMCYFNNWPQYQPDVRGMKLDDIDPCL--CTHLIYSFAGIWENN 82

  Fly    71 DAVTYKIKSLDPSLTNDRQHYRHITALRKKYPHVRFLLSVGGDRDVNSEGVADSDKYLRLLEQSE 135
            :.:| |.|.||        .|:....|:|:...::.|||:|   ..|.|    :..::.::...|
  Rat    83 NTMT-KRKDLD--------DYKEFNDLKKRNNKLKTLLSIG---CWNFE----AGLFITMVSTPE 131

  Fly   136 HRKSFQASVLAELNNNGFDGIDLAWQFPKNRPKLQQGVFKRVWGSLRGWFSSSSVDEK-----SE 195
            .|.:|..||...|...||||::||||:|                   |.:.|...|:.     ::
  Rat   132 SRHTFITSVRKFLRKYGFDGLNLAWQYP-------------------GCYGSPPKDKHLFTILTQ 177

  Fly   196 EHREQFATLLEELQSDLRRGGQLLTVSMLPHVSAELF-IDVPKVLSNVDFVNLGTYDFQ------ 253
            |.|:.|    |:..|..::...::|.::...:|...| ..||::..::|::.:.|||..      
  Rat   178 EIRKAF----EKEVSKNKKSRLIITAALAGVISPIQFGYHVPQLSQSLDYIQVMTYDLHGSWDGY 238

  Fly   254 TPERDPKVADLPTPLYAMYDRDPS-------HNVQYQVQYWMNQTSEISVHKLHVGVTSYGRAWN 311
            |.|.        :|||    :.|:       :|::|.:..|.|:  .:|..||.||..:||..:.
  Rat   239 TGEN--------SPLY----KSPAETGVKAFYNIKYTMHNWKNK--GVSPEKLIVGFPAYGHTFI 289

  Fly   312 MTRNSGI-TGYPPIPAANGAAPPGRQTVTPGLLSWPEICDLL-----QQQPQDREVPHLRKVGDP 370
            ::.::.. .|.|    :|....||..|...|..::.|||..|     |.....::||        
  Rat   290 LSDSTKTEIGAP----SNRGGHPGPYTKKTGFWAYYEICAFLKNGAIQVWNAAQQVP-------- 342

  Fly   371 TKRFGIYAYRAADDQGENGLWVGYEDPLTAAIKAGFVHAQGLGGVAFHDLSMDDFRGQ-CAGEKF 434
                  ||:...:       ||||::..:..|||.::.....||.....:.|||:.|. |....|
  Rat   343 ------YAFHGNE-------WVGYDNVKSFHIKAQWLKNNNFGGAMIWAIGMDDYTGSFCDQGPF 394

  Fly   435 PILRSIK 441
            |:..::|
  Rat   395 PLTSTLK 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf5NP_611321.3 GH18_IDGF 30..444 CDD:119352 108/442 (24%)
Glyco_18 30..423 CDD:214753 100/421 (24%)
RGD1309110XP_006233175.1 GH18_chitolectin_chitotriosidase 41..404 CDD:119351 108/441 (24%)
Glyco_18 43..382 CDD:214753 99/418 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350372
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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