DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf5 and Chit1

DIOPT Version :9

Sequence 1:NP_611321.3 Gene:Idgf5 / 37104 FlyBaseID:FBgn0064237 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:450 Identity:123/450 - (27%)
Similarity:217/450 - (48%) Gaps:88/450 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLCSFLAFFQSTYAEVGKLVCFYDAQSFVREGPAQMSLAELEPALQFCNFLVYGYAGIDAVTYK 76
            |.|..........:....||.|::...:..|.|.|:....:::|.|  |..::|.:||::  .::
  Rat     5 LALAGVTTLLMIQWGSAAKLFCYFTNWAQYRSGAARFLPRDVDPNL--CTHVIYAFAGLN--NHQ 65

  Fly    77 IKSLDPSLTNDRQHYRHITALRKKYPHVRFLLSVGGDRDVNSEGVADSDKYLRLLEQSEHRKSFQ 141
            :.:::|   ||...|:.:.:|:|:.|.::.||:|||    .|.|   :.|:..::..:..|::|.
  Rat    66 VSTVEP---NDELFYQELNSLKKRNPKLKTLLAVGG----WSFG---TQKFTDMVATASTRQTFV 120

  Fly   142 ASVLAELNNNGFDGIDLAWQFPKNRPKLQQGVFKRVWGSLRGWFSSSSVDEKSEEHREQFATLLE 206
            .|.|:.|..:||||:||.|::|.:|                   .|.:||      :|:|..|::
  Rat   121 NSALSFLRTHGFDGLDLDWEYPGSR-------------------GSPAVD------KERFTALIQ 160

  Fly   207 EL----QSDLRRGG--QLLTVSMLP----HVSAELFIDVPKVLSNVDFVNLGTYDFQTPERDPKV 261
            :|    |.:.|..|  :||..:.:|    ||.|...:|  |::.::||:||..|||.:..  .|.
  Rat   161 DLAKAFQEEARASGKSRLLLTAAVPTGRGHVDAGYEVD--KIVQSLDFINLMAYDFHSSW--DKT 221

  Fly   262 ADLPTPLYAMY---DRDPSHNVQYQVQYWMNQTSEISVHKLHVGVTSYGRAWNM--TRNSGITGY 321
            ....:|||...   .:|...||...|..|:.:.:..|  ||.:|:.:|||::.:  :.:||: |.
  Rat   222 TGHNSPLYKRQGETGKDAEKNVDAAVTLWLQKGTPAS--KLMLGMPAYGRSFTLASSSDSGV-GA 283

  Fly   322 PPIPAANGAAPPGRQTVTPGLLSWPEICDLL-QQQPQDREVPHLRKVGDPTKRFGIYAYRAADDQ 385
            |    |.|...||..|...|:|.:.|:|... :|:.:|::||::                   .|
  Rat   284 P----ATGPGAPGPYTKEKGILVYFEVCSWKGKQRIEDQKVPYV-------------------SQ 325

  Fly   386 GENGLWVGYEDPLTAAIKAGFVHAQGLGGVAFHDLSMDDFRGQ-CAGEKFPILRSIKFKL 444
            |..  |||::|..:...||.:|..:||||.....|..|||:|. |...::|::|::..:|
  Rat   326 GNQ--WVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGSFCNEGQYPLIRTLHQEL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf5NP_611321.3 GH18_IDGF 30..444 CDD:119352 120/430 (28%)
Glyco_18 30..423 CDD:214753 113/408 (28%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 119/429 (28%)
ChtBD2 416..463 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350396
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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