DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf5 and chil-23

DIOPT Version :10

Sequence 1:NP_611321.3 Gene:Idgf5 / 37104 FlyBaseID:FBgn0064237 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_001254212.1 Gene:chil-23 / 187739 WormBaseID:WBGene00011167 Length:432 Species:Caenorhabditis elegans


Alignment Length:493 Identity:92/493 - (18%)
Similarity:169/493 - (34%) Gaps:152/493 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IQKNPFLGLLLCSFLAFFQSTYAEVGKLVC---FYDAQSFVREGPAQMSLAELEPALQFCNFLVY 65
            :.|.|..|..:...:..........|..:|   ::.|:|.|               |..|:..:.
 Worm    27 VTKQPTSGKYIIITITLISIIIVGFGLGLCAQIYFQAESDV---------------LPICDKRII 76

  Fly    66 GY---AGIDAVT-----------YKIKSLDPSLT----NDRQHYRHI---TALRKKYPHVRFLLS 109
            ||   :|...:|           :....:.|..|    |..:..|.:   ..:|.....::.:.|
 Worm    77 GYYSGSGTSNITSTQLSNLTHTVFAFVYMTPDGTLLFNNQIEKNRFLKLKEVVRNGNSKIKLMFS 141

  Fly   110 VGGDRDVNSEGVADSDKYLRLLEQSEHR-KSFQASVLAELNNNGFDGIDLAWQFPKNRPKLQQGV 173
            :||         .|:.||...:..||.| ::|..|:|..|.....||:||.|::|:         
 Worm   142 IGG---------KDNSKYFSSVIPSEERIQTFIESILEFLEAYDLDGVDLFWKWPE--------- 188

  Fly   174 FKRVWGSLRGWFSSSSVDEKSEEHREQFATLLEELQS--DLRRGGQLLTVSMLPHVSAELFID-- 234
                                 ||:|:.:...:.:|:.  :.::...:|::.:.|..     :|  
 Worm   189 ---------------------EEYRDAYFAFINQLRKTFEAKKKYYILSIVIPPPT-----LDGW 227

  Fly   235 ----VPKVLSNVDFVNLGTYDFQTPERD---PKVADLPTPLYAMYDRDPSHNVQYQVQYWMNQTS 292
                :.|::.:|||:|..:.|:.||..|   ..:|....|:|.........||.:..:.:...|.
 Worm   228 GKKRLNKIIESVDFINAYSTDYYTPLADNLSDDIAGPSAPIYFGAQGKSERNVHHTARNYSCLTK 292

  Fly   293 EISVHKLHVGVTSYGRAWN------MTRNSGITGYPPIPAANGAAPPGRQTVTPGLLSWPEICDL 351
            :.|  |.::.:..|...|.      :....|:..:        .||...:||....||       
 Worm   293 QAS--KFNIVIPFYATLWENVYETVLDSKRGVYRH--------VAPFYGRTVGKTYLS------- 340

  Fly   352 LQQQPQDREVPHLRKVGDPTKRFGIYAY------RAADDQGEN-GLWVGYEDPLTAAIKAGFVHA 409
                          ::....:.|.:.:|      |||...... |:::.:|...:...|..:|..
 Worm   341 --------------RLAVKQEGFQVESYSYDPAPRAAFSYNRTIGIYLTFETKESIRAKIDYVKD 391

  Fly   410 QGLGGVAFHDLSMDD----------FRGQCA---GEKF 434
            :.||||....:.|||          |.|.|.   |.|:
 Worm   392 RILGGVWIFSVDMDDETNSQLKAVSFDGFCTIGNGSKY 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf5NP_611321.3 GH18_IDGF 30..444 CDD:119352 88/467 (19%)
chil-23NP_001254212.1 Glyco_18 74..405 CDD:214753 74/405 (18%)

Return to query results.
Submit another query.