DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf5 and chil-19

DIOPT Version :9

Sequence 1:NP_611321.3 Gene:Idgf5 / 37104 FlyBaseID:FBgn0064237 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_496026.2 Gene:chil-19 / 187736 WormBaseID:WBGene00011162 Length:452 Species:Caenorhabditis elegans


Alignment Length:415 Identity:78/415 - (18%)
Similarity:162/415 - (39%) Gaps:106/415 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CNFLVYGY-----------AGIDAVTYKIKSLDPSLTND----------RQHYRHITALRKKY-P 102
            ||..:.||           ..:..:|:.:.:. .::|:|          :..:.::..:.|:. |
 Worm    89 CNKRIIGYYFATQTSVITRDQVSKLTHAVFAF-VNMTSDGHLQIDGDLAKNRFTNLIEIAKQQTP 152

  Fly   103 HVRFLLSVGGDRDVNS--EGVADSDKYLRLLEQSEHRKSFQASVLAELNNNGFDGIDLAWQFPKN 165
            .|:.::|:||:.:.|:  .|::..|:          :|.|..|.::.|.....||:||.|::|  
 Worm   153 QVKVMISIGGNDNSNNFKPGLSSPDR----------KKLFINSTVSFLQTYDIDGVDLYWKWP-- 205

  Fly   166 RPKLQQGVFKRVWGSLRGWFSSSSVDEKSEEHREQFATLLEELQSDLRRGGQLLTVSML---PHV 227
                                        .:..::.::..:.:|:..|:|..:...:|::   |.:
 Worm   206 ----------------------------GKTSKDIYSQFINDLRYSLQRQKRNYIMSIVLPPPDM 242

  Fly   228 SA--ELFIDVPKVLSNVDFVNLGTYDFQTPERDP--KVADLPTPLYAMYDRDP---SHNVQYQVQ 285
            .|  |..||:..:..||||:|:.|..:..|.::.  .:....:.|:...:..|   ::|:.:..:
 Worm   243 GANYEAGIDIENIFDNVDFLNIFTMGYFGPWQNDAGMITGAASQLFNGVNGVPGRKTYNIHHSTE 307

  Fly   286 YWMNQTSEISVHKLHVGVTSYGRAWNMTRNSGITGYPPIPAANGAAPPGRQTVTPGLLSWPEIC- 349
            .::.:|.:..  |.::.:..|...|...:  |....|.|.....|      |...|::....:. 
 Worm   308 RYVCKTGQSD--KYNIAIPFYTMLWKHVK--GPVNPPNIEIYRNA------TFQGGVVGETSMSR 362

  Fly   350 DLLQQQPQDREVPHLRKVGDPTKRFGIYAYRAADDQGENGLWVGYEDPLTAAIKAGFVHAQGLGG 414
            .|:|::..|...|    ..:|..| ..:.|.|..:     .::.:|...|.|.|..:|..:.|||
 Worm   363 KLVQEEGYDFSNP----TYNPEIR-AAFKYNATTE-----TFLTFETNDTIAAKIDYVKDRILGG 417

  Fly   415 VAFHDLSMDD----------FRGQC 429
            |....:.|||          |.|.|
 Worm   418 VWIWAVDMDDDSNNLLNLVKFTGYC 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf5NP_611321.3 GH18_IDGF 30..444 CDD:119352 78/415 (19%)
Glyco_18 30..423 CDD:214753 72/397 (18%)
chil-19NP_496026.2 Glyco_18 92..426 CDD:214753 70/394 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164521
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

Return to query results.
Submit another query.