DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf5 and chil-24

DIOPT Version :9

Sequence 1:NP_611321.3 Gene:Idgf5 / 37104 FlyBaseID:FBgn0064237 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_494455.1 Gene:chil-24 / 173661 WormBaseID:WBGene00020407 Length:410 Species:Caenorhabditis elegans


Alignment Length:406 Identity:88/406 - (21%)
Similarity:144/406 - (35%) Gaps:138/406 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YKIKSLDPSL--TNDRQHYRHITALRKKY-----PHVRFLLSVGGDRDVNSEGVADSDKYLRLLE 132
            |.....|.||  .||....| .:.||.|.     .:|:.::|:|        |..:|..:..:|.
 Worm    83 YVQMKFDGSLGFKNDAARIR-FSNLRDKVRRNEDSNVKMMISIG--------GFENSQHFYPVLS 138

  Fly   133 QSEHRKSFQASVLAELNNNGFDGIDLAWQFPKNRPKLQQGVFKRVWGSLRGWFSSSSVDEKSEEH 197
            ..|.:|:|..|:.:.|..:...|:|:.|::|                              |.|.
 Worm   139 NVEMKKAFLNSISSFLAYHELHGVDIFWKWP------------------------------SPED 173

  Fly   198 REQFATLLEELQSDLRRGGQLLTVSMLPHV---SAELFIDVPKVLSNVDFVNLGTYDFQTPERDP 259
            :..::..|.:|:..|  |.:.:....:|..   :.||..|:..:.|:|||.|:.:.|:..|.  |
 Worm   174 KAHYSRFLADLRQHL--GYEFIISVAVPQAEVSNLELGYDLRTISSHVDFFNVHSMDYYGPW--P 234

  Fly   260 KVADLPT----PLYAMYDRDPS-HNVQYQVQYWMNQTSEISVHKLHVGVTSYGRAWNMTRNSGIT 319
            .....||    |||.     |: |||.:.::|:..:|.|..  ||::.:..:.|.|...      
 Worm   235 NEWGKPTGPISPLYG-----PTRHNVDWTLRYYAEKTGEPG--KLNMVIPFFVRLWKNV------ 286

  Fly   320 GYPPIPAANGAAPPGRQTVTPGLLSWPEICDLLQQQPQ----------------------DREVP 362
               |.|     ..||||....        .:|:..:||                      |.|..
 Worm   287 ---PEP-----VEPGRQVFRD--------VELVDNKPQGEAYMSRWSAQHEELDLSPADWDEETR 335

  Fly   363 HLRKVGDPTKRFGIYAYRAADDQGENGLWVGYEDPLTAAIKAGFVHAQGLGGV-AFHDLSMDDFR 426
            ........|:.|                 |.:|...:...|..:|..:.|||| .:|   :|   
 Worm   336 SSYTWNPDTRNF-----------------VTFETDKSIQEKMKYVKEKNLGGVWIWH---VD--- 377

  Fly   427 GQCAGEKFPILRSIKF 442
               |.||  :|.|::|
 Worm   378 ---ANEK--LLDSVRF 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf5NP_611321.3 GH18_IDGF 30..444 CDD:119352 88/406 (22%)
Glyco_18 30..423 CDD:214753 81/385 (21%)
chil-24NP_494455.1 Glyco_18 55..378 CDD:214753 82/392 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164520
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

Return to query results.
Submit another query.