DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf5 and Chia

DIOPT Version :9

Sequence 1:NP_611321.3 Gene:Idgf5 / 37104 FlyBaseID:FBgn0064237 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_997469.1 Gene:Chia / 113901 RGDID:1303058 Length:473 Species:Rattus norvegicus


Alignment Length:428 Identity:107/428 - (25%)
Similarity:188/428 - (43%) Gaps:86/428 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LVCFYDAQSFVREGPAQMSLAELEPALQFCNFLVYGYAGIDAVTYKIKSLDPSLTNDRQHYRHIT 95
            |||::...:..|.|.......::.|.|  |..|:|.:||:.  ..:|.:::   .||...|:...
  Rat    24 LVCYFTNWAQYRPGLGSFKPDDINPCL--CTHLIYAFAGMQ--NNQITTIE---WNDVTLYKAFN 81

  Fly    96 ALRKKYPHVRFLLSVGGDRDVNSEGVADSDKYLRLLEQSEHRKSFQASVLAELNNNGFDGIDLAW 160
            .|:.:...::.||::||    .:.|.|   .:..::..|::|::|..||:..|...||||:||.|
  Rat    82 DLKNRNSKLKTLLAIGG----WNFGTA---PFTTMVSTSQNRQTFITSVIKFLRQYGFDGLDLDW 139

  Fly   161 QFPKNR--PKLQQGVFKRVWGSLRGWFSSSSVDEKSEEHREQFATLLEELQSDLRRGGQLLTVSM 223
            ::|.:|  |...:.:|..:...||..|...::    |.:|.:.                ::|.::
  Rat   140 EYPGSRGSPPQDKHLFTVLVKELREAFEQEAI----ESNRPRL----------------MVTAAV 184

  Fly   224 LPHVS-AELFIDVPKVLSNVDFVNLGTYDFQ------TPERDPKVADLPTPLYAMYDRDPSH--- 278
            ...:| .:...::|::...:||:::.|||..      |.|.        :|||.:.....|:   
  Rat   185 AAGISNIQAGYEIPELSQYLDFIHVMTYDLHGSWDGYTGEN--------SPLYKLPTETGSNAYL 241

  Fly   279 NVQYQVQYWMNQTSEISVHKLHVGVTSYGRAWNMTRNSGITGYPPIPAANGAAPPGRQTVTPGLL 343
            ||.|.:.||.:..:  ...||.||...||..:.:: |...||.....:.||  |.|..|...|..
  Rat   242 NVDYVMNYWKDNGA--PAEKLIVGFPEYGHTYILS-NPSDTGIGAPTSGNG--PAGPYTRQAGFW 301

  Fly   344 SWPEICDLLQQ-QPQD----REVPHLRKVGDPTKRFGIYAYRAADDQGENGLWVGYEDPLTAAIK 403
            ::.|||..|:. ..||    :|||              |||:..:       ||||::..:.::|
  Rat   302 AYYEICTFLRNGATQDWDAPQEVP--------------YAYKGNE-------WVGYDNIKSFSVK 345

  Fly   404 AGFVHAQGLGGVAFHDLSMDDFRGQ-CAGEKFPILRSI 440
            |.::.....||.....:.:|||.|. |...|||:..::
  Rat   346 AQWLKQNNFGGAMIWAIDLDDFTGSFCDQGKFPLTSTL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf5NP_611321.3 GH18_IDGF 30..444 CDD:119352 107/428 (25%)
Glyco_18 30..423 CDD:214753 99/408 (24%)
ChiaNP_997469.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 107/428 (25%)
Glyco_18 24..365 CDD:214753 99/408 (24%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 70..71 0/3 (0%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 97..100 2/6 (33%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 210..213 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..421
ChtBD2 426..473 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350360
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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