DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18540 and CheA87a

DIOPT Version :10

Sequence 1:NP_611316.2 Gene:CG18540 / 37097 FlyBaseID:FBgn0034326 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_650280.1 Gene:CheA87a / 41642 FlyBaseID:FBgn0038142 Length:183 Species:Drosophila melanogaster


Alignment Length:165 Identity:36/165 - (21%)
Similarity:62/165 - (37%) Gaps:12/165 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SFCISSLLSVCIFANLYNGCAAKPNWEATPLSIGGTTTNPSAMDMNLRIERISRSEFGFSGTFFW 67
            |.|..|.|:|.....|.:....:.........:...|.:.|.:...|||.....:|...||....
  Fly     4 SLCPVSYLAVLAIIVLTSNITVQAKRTFRIQKLEKVTEDTSYLRSRLRIAESEENELKVSGYLDL 68

  Fly    68 NIDVDDSVMVEMRILSSYSGDESDYKLTPMSIQPQKFTEYVNTFYKDLLLPNLGNCTDLPVYENE 132
            |..:|:...|.:::..|...|....|:....:|   ..:::.::|||:....:..      |.|.
  Fly    69 NQRLDNDWTVVLKVSRSPDSDGDYEKVLTFEMQ---LCDFMKSYYKDIFYERIKE------YSNA 124

  Fly   133 FVP---PWPKATYNFTRCALNGQGLPDILADGFYK 164
            ..|   |.||..|.......|.:.|..:::.|||:
  Fly   125 PHPSSCPLPKERYVLEDYPFNVKLLKKLMSPGFYR 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18540NP_611316.2 DUF1091 88..164 CDD:461928 17/78 (22%)
CheA87aNP_650280.1 DM8 91..181 CDD:214778 17/78 (22%)

Return to query results.
Submit another query.