DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18539 and CG18540

DIOPT Version :10

Sequence 1:NP_611315.3 Gene:CG18539 / 37096 FlyBaseID:FBgn0034325 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_611316.2 Gene:CG18540 / 37097 FlyBaseID:FBgn0034326 Length:190 Species:Drosophila melanogaster


Alignment Length:189 Identity:78/189 - (41%)
Similarity:117/189 - (61%) Gaps:5/189 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MISCC--SLLFL-LATLLIDGCKAGRNWEYEPLSLTSYSSDESLLKITTKIDRLGRSDYAFSMTL 62
            |||.|  |||.: :...|.:||.|..|||..|||:...:::.|.:.:..:|:|:.||::.||.|.
  Fly     1 MISFCISSLLSVCIFANLYNGCAAKPNWEATPLSIGGTTTNPSAMDMNLRIERISRSEFGFSGTF 65

  Fly    63 DWNYDVDKDTMVEADVHHCSSGDEDDYKMMPWSIPKQPFFEYLNGFYKDAFIKNVGHCSNMVQFD 127
            .||.|||...|||..:....||||.|||:.|.||..|.|.||:|.||||..:.|:|:|:::..::
  Fly    66 FWNIDVDDSVMVEMRILSSYSGDESDYKLTPMSIQPQKFTEYVNTFYKDLLLPNLGNCTDLPVYE 130

  Fly   128 GDFVPPWPRNVYKLDKCVASGEGLPDIAPEGFYKLEYKMTGQVDWGFT--LIVKVSPKV 184
            .:||||||:..|...:|..:|:|||||..:||||.|..:|.|.:...|  :::::..|:
  Fly   131 NEFVPPWPKATYNFTRCALNGQGLPDILADGFYKGEAVITAQPNLEVTVSVVLRIRTKM 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18539NP_611315.3 DUF1091 85..162 CDD:461928 37/76 (49%)
CG18540NP_611316.2 DUF1091 88..164 CDD:461928 36/75 (48%)

Return to query results.
Submit another query.