DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fj and Fjx1

DIOPT Version :10

Sequence 1:NP_477483.1 Gene:fj / 37089 FlyBaseID:FBgn0000658 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001102425.1 Gene:Fjx1 / 366140 RGDID:1306113 Length:449 Species:Rattus norvegicus


Alignment Length:503 Identity:155/503 - (30%)
Similarity:223/503 - (44%) Gaps:90/503 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 AAFVFGMALGVVVPMFG--LPRHQDSPPDLPEEQIQMVAVEPLSSYRVEFIKETDELSAEQVFRN 146
            ||.::.:|||.::.::|  ||...:.|...|.|                     |.|....:...
  Rat    10 AAGLWLLALGSLLTLWGGLLPPRTELPASRPPE---------------------DRLPRHPIQSG 53

  Fly   147 AFHLEQDKDAPDSMVVKKLDTNDGSIKEFHVQRTASGRYRKGPERRLSKKMPERVQPQETSRSPT 211
            ....|.....|..:|   .|...||:|.|....|.:......|.|          .|.:..|...
  Rat    54 GPAPEPRFPLPPPLV---WDARGGSLKTFRALLTLAAGADNPPGR----------HPDDRGRHVP 105

  Fly   212 TSPTNPTSEHQAGFIEEDVYWGPTVEQALPKGFAAKDQVSWERFVGEQGRVVRLEQ-GCGRMQNR 275
            :..:.| :||.|  :...|:|...:|:.:|:||:.....:|.. |....|||.|:: ||||..||
  Rat   106 SGLSWP-AEHTA--VHGGVFWSRGLEEQVPRGFSEAQAAAWLE-VARGARVVALDRGGCGRSSNR 166

  Fly   276 MVVFADGTRACARYRQNTDQIQGEIFSYYLGQLLNIS-NLAPSAATVVDTSTPNWAAALGDITQA 339
            :..||||||||.||..|.:|||||..||||.:||.:. ::.|.|...|:.....|.....::..|
  Rat   167 LARFADGTRACVRYGINPEQIQGEALSYYLARLLGLQRHVPPLALARVEARGAQWVQVQEELRTA 231

  Fly   340 QWKERRPVVLTRWLSDLEPAGIPQPFQPLERHLNKHDVWNLTRHMQSERQAQSQPHGLLKRLGAA 404
            .|.|...|.|||||.:|....:|:|             |      :||       .|.|:.|..|
  Rat   232 HWTEGSVVSLTRWLPNLTDVVVPEP-------------W------RSE-------DGRLRPLRDA 270

  Fly   405 SSPGSAHQSNAIEETGTGTETANGALVQRLIELAQWSDLIVFDYLIANLDRVVNNLYNFQWNADI 469
                             |.|..|.:..: |::|.||:|||:||||.||.||:|:||::.||:..:
  Rat   271 -----------------GGELTNLSQAE-LVDLVQWTDLILFDYLTANFDRLVSNLFSLQWDPRV 317

  Fly   470 MAAPAHNLARQSASQLLVFLDNESGLLHGYRLLKKYEAYHSLLLDNLCVFRRPTIDALRRL-RAA 533
            |.....||.| .....|||||||:||:||||:...::.|:..||.::||||..|...:..| |..
  Rat   318 MHRATSNLHR-GPGGALVFLDNEAGLVHGYRVAGMWDKYNEPLLQSVCVFRERTARRVLELHRGQ 381

  Fly   534 GAGRRLRDLFERTTSAGVRDVLPSLPDKSVKILVERIDRVLGQVQKCQ 581
            .|..||..|:.|.......  |..|.|...::|..|:|.:...:..|:
  Rat   382 DAAARLLRLYSRHEPRFPE--LAELADPHAQLLQRRLDFLAKHILHCK 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fjNP_477483.1 Four-jointed-like_C 255..583 CDD:198459 118/330 (36%)
Fjx1NP_001102425.1 Four-jointed-like_C 145..429 CDD:198459 118/331 (36%)

Return to query results.
Submit another query.