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Protein Alignment CG33958 and gcy-11

DIOPT Version :9

Sequence 1:	NP_001033958.1	Gene:	CG33958 / 37088	FlyBaseID:	FBgn0053958	Length:	710	Species:	Drosophila melanogaster
Sequence 2:	NP_001359843.1	Gene:	gcy-11 / 181745	WormBaseID:	WBGene00001537	Length:	1168	Species:	Caenorhabditis elegans

Alignment Length:	725	Identity:	203/725 - (28%)
Similarity:	321/725 - (44%)	Gaps:	135/725 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    39 SNRPM---ESRTAPDDVNPSGEGGLLLVPTHHNLQLDKISVRSISSEDISNGGSGRCCNAAARNP 100
            ||.|:   |..|....:.|.|:|...::  ..||....|....:.......|.:...|.|..||
Worm   451 SNGPIPLPEWATLAARMLPDGKGNYSII--WKNLTQLGIFNGELPQSKPECGFNNELCPAGIRN- 512

  Fly   101 AIKTGRRLQLMQMIILPFIPILALIVQTSVTL--------------QEILEYRSAVADIETQVTI 151
                   |..:::|::. :.::|:::...|..              ...|.:|..|..::.....
Worm   513 -------LSELEIIVIA-VCVVAILILVGVIAYIARWIAYERRLESSYFLVHRKHVQLVDMTKFG 569

  Fly   152 ATDLGKVVTRLQLERSE---------VAFYIFTNGSKQ---RANLTLR-----FANTDHAL---- 195
            ::..|.::......||:         .....:|||.::   |.|...|     .||.|..|
Worm   570 SSRGGSMIQSAMSMRSQYEDSGPVGGATMNFYTNGIRKAAIRRNQMQRSDKGPAANRDEWLEIVD 634

  Fly   196 -------NNMTTWSEISVPTAPDEDEDDREMMLNRYEFQSRLNEFRDRVRLEPEESSITEVMNWY 253
                   |.:.|..:|:........|..:|:.|...|....||.|...:    .||.:...::.|
Worm   635 WHLAKYENTLVTVRKINKTQLKLTREMKQEIDLLMNETHENLNRFFGLI----NESDLIFTIHSY 695

  Fly   254 TSINRGLLHHLSEQIKETDNSGVWRYLVGF-KNLLKSIECQNIATSFGIRYYGRGSLTAENFV-- 315
                 |....|.:.::..|......:.|.| ::::|.::..:..:..|  |:  |:|.:.|.:
Worm   696 -----GPRKSLMDLLRNDDLRLDRMFKVSFVEDVVKGLQFLHEGSKIG--YH--GNLKSSNCIVD 751

  Fly   316 SYVRYEF--MAREMI---------NSTLNYAPMLKNMYTNITSTKKFHRAKQMGTTLLKNNPNVS 369
            :|.|.:.  ...|.|         :..|.:||.:...|.......|...||....:|
Worm   752 AYWRIKLSNYGMEQIRVEEPESKPDDLLWFAPEIIRRYAVKHDLSKLELAKADIYSL-------- 808

  Fly   370 NERSAIEYYELMNN---YTDDLRILQKALRRL----------------------IKEYVDKTLVE 409
                ||..||:...   :.|||....:.:.:|                      :...|:|..||
Worm   809 ----AIVLYEIYGRQGPFGDDLLDSDEIIEQLKFPDGGALTRPDIHLITKAPYPLASVVEKCWVE 869

  Fly   410 --ADRKEAIGIAILVVVLIVSPVIIVLVKNAAATI----QLYALNL----SQKAKELKREKRKSD 464
              |.|.     :|..|..::.|:...|..|.|..|    ..|..||    .::.::|:.|:::::
Worm   870 DPASRP-----SIKKVRELLKPLSKGLKGNIADNIMNLLDRYRNNLEDVIKERTEQLEDERKRNE 929

  Fly   465 SLLFQMLPPSVAMQLKQTQQVPAELYEAVTIYFSDIVGFTEIAADCTPLEVVTFLNSIYRVFDER 529
            |||.|:||.|||..||..|.|.||.|::|:||||||||||.:::..|||:||..||::|..||..
Worm   930 SLLLQLLPKSVANSLKNGQPVDAEFYDSVSIYFSDIVGFTALSSKSTPLQVVNMLNNLYTNFDTI 994

  Fly   530 IECYDVYKVETIGDSYMVASGLPVKNGNKHISEIATMALDLLDASSVFRIPRAGDEFVQIRCGVH 594
            |:.:|.||||||||:||..||||..|...|..|:|:.:|:|||:...|.:....||.:::|.|.|
Worm   995 IDKFDCYKVETIGDAYMFVSGLPEVNSYLHAGEVASASLELLDSIKTFTVSHCPDEKLRLRIGNH 1059

  Fly   595 TGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEAQKIHITEEMHDSLQQVGGFRTEHRGLIDVK 659
            |||||.|:||.:|||||||||||..|:.|||:||..:|.|:.:.::.:.:.||:.||.|..|.:|
Worm  1060 TGPVVTGVVGIRMPRYCLFGDTVIIANMMESSGEPMRIQISSDAYELILKCGGYVTEQREKIVLK 1124

  Fly   660 GKGLMSTYWL 669
            .|..:.|||:
Worm  1125 NKLEVMTYWM 1134

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.