DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33958 and odr-1

DIOPT Version :9

Sequence 1:NP_001033958.1 Gene:CG33958 / 37088 FlyBaseID:FBgn0053958 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:515 Identity:142/515 - (27%)
Similarity:222/515 - (43%) Gaps:106/515 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 YTSINRGLLHHLSEQ----IKETDNSGVWR-------YL----VGFKNLLKSIECQ-NI-----A 296
            :|.:.||.|......    :.:|..|...|       ||    :|:...|::..|. :|     .
 Worm   559 HTLVERGTLEEFCLDRDFGMDDTFKSAFMRDILKGLQYLHKSSIGYHGHLQASTCLIDINWVLKL 623

  Fly   297 TSFGIRYYGRGSLTAEN---------FVSYVRYEFMAREMINSTLNYAPMLKNMYTNITSTKK-- 350
            |.:|:..:....|.|||         .::|.:|.....|.|.   .|....|.....:..:.|  
 Worm   624 TLYGVSNFMSDQLDAENIKVPEQAAHMITYPQYVCFPPEHIR---EYDDSGKQPPRVVRGSPKGD 685

  Fly   351 --------------------FHRAKQMGTTLLKNNPNVSNERSAIEYYELMNNYTDDLRILQKAL 395
                                .|..::...||:|   .:.||..       |...|||.| .:..|
 Worm   686 IYCVGMIFYMMVEREDPYHLIHSVERPNATLIK---QILNENH-------MPRITDDYR-QENML 739

  Fly   396 RRLIKEYVDKTLVEADRKEAIGIAILVVVLI--------VSPVIIVLVKNAAATIQLYALNLSQK 452
            ..:.||..|:   ..|::..|...|..:..:        |..:|.:..|.|....|:.|:    :
 Worm   740 LEMCKECWDR---NPDKRPTIKKLIESISTVY
PLSKGNLVDQMIRMSEKYADELEQMVAI----R 797

  Fly   453 AKELKREKRKSDSLLFQMLPPSVAMQLKQTQQVPAELYEAVTIYFSDIVGFTEIAADCTPLEVVT 517
            ..:|...:.::..||.:|||.|:|..||....:|...||:.|:.|..|..|..:....:|.:|:.
 Worm   798 TADLADAQMQTMRLLNEMLPASIAKDLKNGLIMPPRSYESATVMFVQICDFNALMKRSSPEQVIA 862

  Fly   518 FLNSIYRVFDERIECYDVYKVETIGDSYMVASGLPVKNGNKHISEIATMALDLLDASSVFRIPRA 582
            |||.||..||..|:.:|.|||||.|::||||||:|.:|..:||.|:|.::|::.:.|.::.:...
 Worm   863 FLNDIYDQFDTVIKRHDAYKVETTGETYMVASGVPHENEGRHIFEVAEISLEIREISYIYVLQHD 927

  Fly   583 GDEFVQIRCGVHTGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEAQKIHITEEMHDSLQQVGG 647
            .:..::||.|.|.||:.||::|.:.|||||||||||.||||:|.....:|..:|.....|.....
 Worm   928 KNYKLRIRIGFHAGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITARLLFDSHE 992

  Fly   648 FRTEHRGLIDVKGKGLMSTYWLTCKDGPVRAREEISWRADIQPVFLDHLKLHPPTDYKLP 707
            ::...||::.|||||.::.|||.                       :|  ||..|:..||
 Worm   993 YKFVKRGIVHVKGKGEVNCYWLN-----------------------EH--LHEETEPPLP 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33958NP_001033958.1 NIT 159..396 CDD:285564 37/194 (19%)
HNOBA <439..479 CDD:285003 10/39 (26%)
CYCc 459..647 CDD:214485 75/187 (40%)
Guanylate_cyc 485..669 CDD:278633 74/183 (40%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:385651
PK_GC 495..768 CDD:270894 44/225 (20%)
CYCc 803..996 CDD:214485 75/192 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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