DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5721 and armc6

DIOPT Version :9

Sequence 1:NP_611306.1 Gene:CG5721 / 37084 FlyBaseID:FBgn0034315 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_009297218.1 Gene:armc6 / 555425 ZFINID:ZDB-GENE-100616-1 Length:469 Species:Danio rerio


Alignment Length:474 Identity:157/474 - (33%)
Similarity:254/474 - (53%) Gaps:28/474 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAK-VISQDTFDDVVKENVVEFSMTPSEAKEETIKQFEAQGINLANIIKDL-----SVNPQTGQP 59
            ||| .|:|||||.||:||:.:|.|..|||.:|.|:|||:||::|:||:|.:     ..|.|....
Zfish     1 MAKRRITQDTFDSVVRENIDDFDMEESEALKEAIEQFESQGVDLSNIVKAVPKVSSEENAQDQTH 65

  Fly    60 VINETVDKIKEHIGQKLEETTELLEQLATLDAECKKSLAHRVLAGKNGAHDALITLLEETLSAES 124
            .:.:.::.:|..:.   ..:|.:|:.|.....:|....|.|.||.:..|:..:::..:::    :
Zfish    66 EVLQALESLKSAVS---SSSTSVLDDLRLFTDQCNLGFAQRYLAAQKDAYPTILSCCQKS----A 123

  Fly   125 PNESVLKKSLEAINSLTHKQPDLFDAEAMAVVLKLLALKVESEE--VTLLTLQWLQKACIMHEMN 187
            .::..|..:|.|:.:||..||||.|.|....::::|......::  |..|.::.::..|:.||.|
Zfish   124 GDKEALSVALAALCALTDGQPDLLDEEGKLFLIRVLTEHQHQQDAGVVCLCVRTVRNCCLKHENN 188

  Fly   188 RQNIMNTSALKLMKPLLGKGKDR------LVRELTAVFRFLVLDDDIRVEFGCAHEHARQIAGEV 246
            ||:::....|    |||.....|      :||:.....|.:..|||:||.||.|||||:.|..|.
Zfish   189 RQDLVKAGVL----PLLAGSITRYLQHPEVVRDACVALRVMTFDDDVRVPFGHAHEHAKMIVLEQ 249

  Fly   247 --LITLVELLPAY-QDPNVLADLLLTIGTLAVRQELCTAIDEAGGLKSVFEIMSSNLDEVRLNRE 308
              |..:||...|: ::.:||::|..|:..||||.|.|..|.:.||||.:..:::.:||...|.::
Zfish   250 NGLKVMVEAAKAHPENTSVLSELCATLSRLAVRNEFCQDIVDLGGLKFMITLLADSLDCQELVKQ 314

  Fly   309 ALKLLRALAGQDSVKSHIVQQGVAPIIKQLLETHQSNENIVAAALACVTTLTLRVQEHSAAFFDT 373
            .|..|:|:||.|.||..||..|.|.:|...:..|.:|..:.....|.:..|.||...:.....::
Zfish   315 VLSALKAIAGNDDVKDAIVNAGGAELIVMAMNRHMANAQVCEQGCAALCVLALRKPNNCKVIMES 379

  Fly   374 GIAEVIVEALRAHPKHKIVQRNGAWAIRNMVSRSRNQCETWISFGVEDLLNMAMKEHPSVEQDIK 438
            |.|...::|::.||....:|:.....:||:|:|||:..:..:..|.|.|::.|:..|.......:
Zfish   380 GGALAALQAMKTHPAEANMQKQSCMLLRNLVARSRDFTQPILEMGAEALISQALAAHRDCGDVGR 444

  Fly   439 AALRDLGCSVHLREEWTGT 457
            ||||||||.|.|||.||||
Zfish   445 AALRDLGCQVELRELWTGT 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5721NP_611306.1 ARM 282..405 CDD:237987 35/122 (29%)
armadillo repeat 282..316 CDD:293788 10/33 (30%)
armadillo repeat 323..361 CDD:293788 10/37 (27%)
armadillo repeat 367..403 CDD:293788 7/35 (20%)
armc6XP_009297218.1 ARM 155..280 CDD:237987 39/128 (30%)
armadillo repeat 189..227 CDD:293788 10/41 (24%)
armadillo repeat 243..279 CDD:293788 10/35 (29%)
ARM 265..342 CDD:237987 30/76 (39%)
armadillo repeat 287..323 CDD:293788 11/35 (31%)
armadillo repeat 329..365 CDD:293788 9/35 (26%)
ARM 330..>425 CDD:237987 23/94 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590168
Domainoid 1 1.000 254 1.000 Domainoid score I2016
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14121
Inparanoid 1 1.050 255 1.000 Inparanoid score I3163
OMA 1 1.010 - - QHG58269
OrthoDB 1 1.010 - - D273391at33208
OrthoFinder 1 1.000 - - FOG0007267
OrthoInspector 1 1.000 - - oto39993
orthoMCL 1 0.900 - - OOG6_105878
Panther 1 1.100 - - LDO PTHR22895
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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