DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5721 and armc6

DIOPT Version :9

Sequence 1:NP_611306.1 Gene:CG5721 / 37084 FlyBaseID:FBgn0034315 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_012815487.1 Gene:armc6 / 448573 XenbaseID:XB-GENE-953885 Length:469 Species:Xenopus tropicalis


Alignment Length:464 Identity:160/464 - (34%)
Similarity:246/464 - (53%) Gaps:17/464 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KVISQDTFDDVVKENVVEFSMTPSEAKEETIKQFEAQGINLANIIKDL----SVNPQTGQPVINE 63
            |.::|:|||.:|:||:.||.|.|.||..|.|:|||:||::|.||:|.:    ..|.......|.:
 Frog     6 KWVTQETFDAIVQENMTEFEMDPEEALNEAIQQFESQGVDLTNIVKAVKKPCDENEVASNHDILQ 70

  Fly    64 TVDKIKEHIGQKLEETTELLEQLATLDAECKKSLAHRVLAGKNGAHDALITLLEETLSAESPNES 128
            |::.:::.:  :....:|:.|.|.....:||:.||||.|||:..|:..::    ||......:..
 Frog    71 TLESLRKSV--QSSSVSEISELLIKFGDQCKQGLAHRYLAGQKSAYSVIL----ETWRLSEDDRE 129

  Fly   129 VLKKSLEAINSLTHKQPDLFDAEAMAVVLKLLALKVESEEVTLLTLQWLQKACIMHEMNRQNIMN 193
            .|..:|.|:::||..||||.:|....::|:.........||.||..:..:..|:.||.|||:::.
 Frog   130 ALLNALYAMSALTEGQPDLLEASGQQLLLQTFKNHAGDAEVILLGTRLTRHVCLKHEQNRQDLVK 194

  Fly   194 TSALKLMKPLL---GKGKDRLVRELTAVFRFLVLDDDIRVEFGCAHEHARQIAGE--VLITLVEL 253
            ...|.|:...:   |...| :|||..:..|.:..||||||.||.||:||:.|..|  .|..|:|.
 Frog   195 AGILPLLTGAIKTHGSDAD-VVREACSALRIMTFDDDIRVPFGHAHDHAKMIVLENGGLKCLIEA 258

  Fly   254 LPAYQD-PNVLADLLLTIGTLAVRQELCTAIDEAGGLKSVFEIMSSNLDEVRLNREALKLLRALA 317
            ..|:.| |.||::|..|:..|.||.|.|..:.:.|||..:..:::..:|...|.::.|..:||:|
 Frog   259 AKAFTDNPGVLSELCGTVSRLCVRNEFCQDVVDLGGLNFMLALLADCIDHQELVKQVLSAIRAIA 323

  Fly   318 GQDSVKSHIVQQGVAPIIKQLLETHQSNENIVAAALACVTTLTLRVQEHSAAFFDTGIAEVIVEA 382
            |.|.||..||..|...:|...:..|..:..|.....|.:..|.||..|:.....:.|.|...::|
 Frog   324 GNDDVKDAIVNSGGTDLIVLAMSRHLCSSQICDQGCAALAMLALRKPENCKVIMEGGGALAALQA 388

  Fly   383 LRAHPKHKIVQRNGAWAIRNMVSRSRNQCETWISFGVEDLLNMAMKEHPSVEQDIKAALRDLGCS 447
            ::|||:...||:.....|||:|||:|:..:..:..|.|.|:..|...|...:...|||||||||.
 Frog   389 MKAHPQDTSVQKQACMVIRNLVSRTRDFSQPILEMGAESLILQARSAHKDCDDVAKAALRDLGCK 453

  Fly   448 VHLREEWTG 456
            |.|:|.|||
 Frog   454 VELKELWTG 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5721NP_611306.1 ARM 282..405 CDD:237987 35/122 (29%)
armadillo repeat 282..316 CDD:293788 7/33 (21%)
armadillo repeat 323..361 CDD:293788 9/37 (24%)
armadillo repeat 367..403 CDD:293788 10/35 (29%)
armc6XP_012815487.1 ARM 185..227 CDD:214547 13/42 (31%)
armadillo repeat 189..227 CDD:293788 10/38 (26%)
armadillo repeat 243..279 CDD:293788 12/35 (34%)
armadillo repeat 288..322 CDD:293788 7/33 (21%)
armadillo repeat 329..367 CDD:293788 9/37 (24%)
armadillo repeat 374..409 CDD:293788 10/34 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 155 1.000 Domainoid score I4208
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H14121
Inparanoid 1 1.050 268 1.000 Inparanoid score I2956
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D273391at33208
OrthoFinder 1 1.000 - - FOG0007267
OrthoInspector 1 1.000 - - oto102413
Panther 1 1.100 - - LDO PTHR22895
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8430
SonicParanoid 1 1.000 - - X6154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

Return to query results.
Submit another query.