DRSC/TRiP Functional Genomics Resources

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Protein Alignment nopo and AT4G01270

DIOPT Version :9

Sequence 1:NP_611305.1 Gene:nopo / 37083 FlyBaseID:FBgn0034314 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_192036.1 Gene:AT4G01270 / 828038 AraportID:AT4G01270 Length:506 Species:Arabidopsis thaliana


Alignment Length:530 Identity:105/530 - (19%)
Similarity:187/530 - (35%) Gaps:153/530 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NLNCVICAELFGQADEVFATV--CGHMFHHNCLNQWLD-----RSKTCPQCRNKCTTRNIFRVYF 60
            |..|.||.|......|...::  |||:||..||.||.:     ..:.||.|:.||:.::..|:||
plant     9 NAICSICYEDLKPVVENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICKQKCSLKDPCRLYF 73

  Fly    61 NLANLDVSHI-----------------DVGSLQEQLDNAMLSMKMVEKERNKDEQQIRDLKETQK 108
            ..:......|                 :|..|:.::.|...:::..:||..:...::....|..|
plant    74 QSSGNQTDSIASDKVVGIEEDPVLLRGEVKRLEGKVQNLTSALEAKKKENVEVSDKLHQCNEQLK 138

  Fly   109 KCLKTIAGLEQKVQKKDFLIS-SYVEQIGVLKSDAHV-----VDGLRKENKTLKSQIQSMEGIS- 166
                     |.||::.:.|.. |..:.:..|||:..:     ...|::....|..::.|::.:| 
plant   139 ---------EDKVKRWEALQEISTTQHLLKLKSEECIQLNSQCVKLQERTVALAKELASLKLVSD 194

  Fly   167 -----------AILAAGSADADRL--------LKNEADPHVLANWVSTLKRELRQCESKKTELRN 212
                       |:|...:...|.:        ::|.:...:||......:.|.|..|..:..|..
plant   195 LSLEEDDVLKLALLGNNAKTKDTIDTLVKSLVIRNRSYKELLAKCNQLGRGEARSSEKLEKALEK 259

  Fly   213 VVKVVQNDLRKEI-ELKRKLEERVSHLESDL------------YQAQEKLQAF-----ENKTAYL 259
            :.|     |:|.: ||:...|||.:....|:            ..|.|.:.:|     :||...:
plant   260 IEK-----LKKRMRELELITEERENRALRDINVSKKCSYTEVSEPAIESMSSFRMLSSDNKVEKI 319

  Fly   260 DSP------------NASCGLNSNILALKREERRTTISPTVKENIKRIEESTSPYLN---IKSSS 309
            .:|            ..||         .|....:.:|.|  :::..:::...|..|   |:..:
plant   320 STPPGKLEEKDGFTIQGSC---------LRGREDSFVSRT--DSVIDVDDDYVPETNTSGIRDWN 373

  Fly   310 VGLAHLLNTKGNIGLAK-----------SKISPIKGVGGGVSMTSGTIRKTSSDLSEKYSIFKKP 363
            ..    :..||:..:.|           |.:||.....|.:..:|||.|.               
plant   374 TN----IEEKGDNSMVKDIKFNIRKDPTSSVSPYSNGSGNIWQSSGTNRN--------------- 419

  Fly   364 RLLLGSSSSSALTATTGSNFVYNGMGGS--EKVDPFAQRAEEEG--LSTIRSSTALSRNVNQRLK 424
               ||..|...     ..|.....:|||  .|.|..:...:.:|  :..:||...:|:.   ...
plant   420 ---LGRWSKHG-----ERNEATPSLGGSVPRKDDLISIGPDGKGGRIKVLRSKPQISKT---NAS 473

  Fly   425 AGSLRNFNLG 434
            :||.:.|.||
plant   474 SGSGKRFKLG 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nopoNP_611305.1 zf-RING_2 5..47 CDD:290367 16/48 (33%)
zf-rbx1 <5..47 CDD:289448 16/48 (33%)
AT4G01270NP_192036.1 RING 12..63 CDD:238093 17/50 (34%)
SPEC <98..280 CDD:295325 37/195 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0827
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 52 1.000 Inparanoid score I2622
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D761263at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4425
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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