Protein Alignment nopo and MEE16

DIOPT Version :10

• Sequence 1: NP_611305.1
• Gene: nopo / 37083
• FlyBaseID: FBgn0034314
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_179455.1
• Gene: MEE16 / 816380
• AraportID: AT2G18650
• Length: 423
• Species: Arabidopsis thaliana
• Alignment Length: 321
• Identity: 73/321 - (22%)
• Similarity: 131/321 - (40%)
• Gaps: 49/321 - (15%)

  Fly     5 NCVICAELFGQADEV-FATVCGHMFHHNCLNQWLDRSKTCPQCRNKCTTRNIFRVYFNLANLDVS 68
            :|.:|...|...|:: ....|.|.||..|::.||....|||.||:     |:...:.:..||..|
plant   125 DCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRS-----NLLSGFSSHHNLSSS 184

  Fly    69 HIDVGSLQEQLDNAML----SMKMVEKERNKDEQQIRDLKETQKKCLK--TIAGLEQKVQKKDFL 127
            ::.|.. .||....|:    |...:..:.|.|.:..| ::..:|.|..  .:.||::||...:.
plant   185 YLLVLE-SEQSSRDMVPVLESNSQLGYDVNNDSESTR-IRSGRKSCDPDGDMDGLDEKVVPLEV- 246

  Fly   128 ISSYVEQIGVLKSDAHVVDGLRKENKTLKSQIQSMEGISAILAAGS----ADADRLLKNEADPHV 188
                  ::|..::..||.:|..::..::....::::| ...|:.||    .|.:..||.......
plant   247 ------KLGKFRNIDHVGEGSDQKKNSISGNSKNVDG-RRCLSMGSYEYIMDQEATLKVHVSTKK 304

  Fly   189 LA--NWVSTLKRELRQCESKKTELRNVVKVVQNDL--RKEIEL-------KRKLEERVSHLESDL 242
            |:  :.|.:.:..:.:|....|     ||.::..:  |:...|       |::.::..|..:||.
plant   305 LSGKDRVPSHRTVMSECGFDPT-----VKGIEKSVVERESFSLSKIWLRGKKEKQKGTSARDSDC 364

  Fly   243 YQAQEKLQAFENKTAYLDSPNASC-GLNSNILALKREE--RRTTISPTVKENIKRIEESTS 300
            .........|.|   :...|..|. ..||..|..|...  |||......::| |.::.|||
plant   365 SFVSSSSLRFPN---HRIPPEESLKSENSESLETKTPSFARRTMHWLAGRQN-KIVQPSTS 421

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nopo	NP_611305.1	RING-H2_TRAIP	5..47	CDD:438143	14/42 (33%)
		SMC_N	<75..>255	CDD:481474	37/200 (19%)
MEE16	NP_179455.1	RING-H2_EL5-like	125..168	CDD:438124	14/42 (33%)