Protein Alignment nopo and rnf2

DIOPT Version :9

• Sequence 1: NP_611305.1
• Gene: nopo / 37083
• FlyBaseID: FBgn0034314
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_998872.1
• Gene: rnf2 / 407872
• XenbaseID: XB-GENE-981241
• Length: 336
• Species: Xenopus tropicalis
• Alignment Length: 279
• Identity: 57/279 - (20%)
• Similarity: 104/279 - (37%)
• Gaps: 47/279 - (16%)

  Fly     4 LNCVICAELFGQADEVFATVCGHMFHHNCLNQWL-DRSKTCPQCRNKCTTRNIFRVYFN----LA 63
            |.|.||.::.  .:.:....|.|.|..:|:...| ..:|.||.||.|..::...|...|    ::
 Frog    49 LMCPICLDML--KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALIS 111

  Fly    64 NLDVSHIDVGSLQEQLDNAMLSMKMVEKERNKDE-----------QQIRDLKETQKKCLKTIAGL 117
            .:..|..:..:.||::      :..:.|..|:..           |.:..|...:|..::..:|.
 Frog   112 KIYPSRDEYEAHQERV------LARINKHNNQQALSHSIEEGLKIQALNRLPRGKKPQVENGSGA 170

  Fly   118 EQKVQKKDFLISSYVEQIGVLKSDAHVVDGLRKENKTLKSQIQSMEGISAILAAGSADADRLLKN 182
            |....      ||:.....|     |........||..|:...|  |:.......:|..|.:|..
 Frog   171 EDNAD------SSHCSNASV-----HSNQEAGPSNKRTKTSDDS--GLELDTNNETASMDSVLDG 222

  Fly   183 EADPHVLANWVSTLKRELRQCESKKTE-LRNVVKVVQNDLRKEIELKRKLEERVSHLESDLYQAQ 246
            .::..::.....||   :.:.:|.:|. ::.......:.|.|.:.::..|||..|..|::    |
 Frog   223 ASEIELVFRPHPTL---MEKDDSAQTRYIKTSGNATVDHLSKYLAVRLALEEFRSKGENN----Q 280

  Fly   247 EKLQAFENK--TAYLDSPN 263
            ..|.|...|  |.|:.:.|
 Frog   281 MSLNAASEKQYTIYIATAN 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nopo	NP_611305.1	zf-RING_2	5..47	CDD:290367	11/42 (26%)
		zf-rbx1	<5..47	CDD:289448	11/42 (26%)
rnf2	NP_998872.1	COG5222	<10..>103	CDD:227547	16/55 (29%)
		RING-HC_RING1_like	51..91	CDD:319445	11/41 (27%)
		RING-HC finger (C3HC4-type)	51..90	CDD:319445	11/40 (28%)
		RAWUL_RING2	225..330	CDD:340687	18/82 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3349
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030