DRSC/TRiP Functional Genomics Resources

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Protein Alignment nopo and CG4325

DIOPT Version :9

Sequence 1:NP_611305.1 Gene:nopo / 37083 FlyBaseID:FBgn0034314 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001259169.1 Gene:CG4325 / 31167 FlyBaseID:FBgn0026878 Length:158 Species:Drosophila melanogaster


Alignment Length:60 Identity:25/60 - (41%)
Similarity:35/60 - (58%) Gaps:6/60 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NLNCVICAELFGQADEVFATVCGHMFHHNCLNQWLDRSKTCPQCRNKCTTRNIFRVYFNL 62
            |:.|.||:|.|..:|.:.|..|||.||.:||:.|..:|:|||.||::..      .||.|
  Fly     5 NVICTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRSQDA------AYFQL 58

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nopoNP_611305.1 zf-RING_2 5..47 CDD:290367 19/41 (46%)
zf-rbx1 <5..47 CDD:289448 19/41 (46%)
CG4325NP_001259169.1 zf-RING_2 8..49 CDD:290367 19/40 (48%)
Prefoldin 112..>151 CDD:298833
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11352
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D103393at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46569
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.020

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