DRSC/TRiP Functional Genomics Resources

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Protein Alignment nopo and SPCC548.05c

DIOPT Version :9

Sequence 1:NP_611305.1 Gene:nopo / 37083 FlyBaseID:FBgn0034314 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_587745.1 Gene:SPCC548.05c / 2539314 PomBaseID:SPCC548.05c Length:468 Species:Schizosaccharomyces pombe


Alignment Length:466 Identity:93/466 - (19%)
Similarity:159/466 - (34%) Gaps:146/466 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LNCVICAELFGQADEVFATVCGHMFHHNCLNQWLDRSKTCPQCRNKCTTR--NIFRVY--FNLAN 64
            |.|.||.|..   ...|.|.|||.:.:.||..||..||:||.||.|..|:  ..:.||  .|:..
pombe    83 LECPICTEAL---QRPFTTHCGHTYCYECLLNWLKESKSCPTCRQKLYTQPSPAYLVYEIMNVVA 144

  Fly    65 LDVSHIDVGSLQEQLDNAMLSMKMV-------EKERNKDEQQIRDLKETQKKCLKTIAGLEQKVQ 122
            ...|...:..:.|   |.....|.|       :::.:.....:.|.::...:|.:....||... 
pombe   145 ASNSGFPLVGINE---NPAKKQKEVLFDGMFKQEDSHYPRSILVDSEDGVLRCARCQWELENPY- 205

  Fly   123 KKDFLISSYVEQIGVLKSDAH------VVDGLRKENKTLKSQIQSMEGISAILAAGSADADRLLK 181
                    :.:..|...||..      ..||...|:.:      |:.|.:.  ..|:...:|...
pombe   206 --------HCDHCGFQISDDQDSGREWFWDGENAESDS------SLNGDNT--RGGNISTNRAFN 254

  Fly   182 NEADPHVLANWVSTLKRELRQCESKKTELRNVVKVVQNDLRKEIELKRKLEERV-SHLESDL--- 242
            |.....:.|                         |.|:.||.:     :.||.| |.||||.   
pombe   255 NMGHAPITA-------------------------VPQDWLRFD-----EGEEFVGSDLESDFSGP 289

  Fly   243 -----------YQAQEKLQAFENKTAYLDSPNASCGLNSNILALKREERRTTISPTVKENIKRIE 296
                       .:|..:|...|:...::...|   |.|.|.:        |.:..|..|.|    
pombe   290 GEYDVDDGFIDNRATSQLSPVESDDDFVAPVN---GSNGNGI--------TALDSTDSEEI---- 339

  Fly   297 ESTSPYLNIKSSSVGLAHLLNTKGNIGLAKSKISPIKGVGGGVSMTSGTIRKTSSDLSEKYSIFK 361
                             .::|     |..:.:.|      ||.:|.|.:  :|..:..::|...:
pombe   340 -----------------DIMN-----GFDEERDS------GGTNMVSRS--ETCYNDGQRYDELR 374

  Fly   362 KPRLLLGSSSSSALTATTGSNFVYNGMGGSEKVDPFAQRAEEEGLST----IRSSTALSRNVNQR 422
            :....:.:.|..:|.:::.::..:|.:  ..:..||:...:|..:.|    :|||.:.|:|    
pombe   375 RELADIQNESLDSLNSSSNNSPSHNNI--HSRQHPFSSDEDEGNIVTNGTGLRSSQSSSQN---- 433

  Fly   423 LKAGSLRNFNL 433
                  |.|:|
pombe   434 ------RGFDL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nopoNP_611305.1 zf-RING_2 5..47 CDD:290367 17/41 (41%)
zf-rbx1 <5..47 CDD:289448 17/41 (41%)
SPCC548.05cNP_587745.1 RING 84..126 CDD:238093 19/44 (43%)
COG2888 <193..213 CDD:268082 4/28 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3349
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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