DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5726 and Ctif

DIOPT Version :9

Sequence 1:NP_611304.1 Gene:CG5726 / 37082 FlyBaseID:FBgn0034313 Length:766 Species:Drosophila melanogaster
Sequence 2:XP_038952934.1 Gene:Ctif / 364900 RGDID:1311887 Length:623 Species:Rattus norvegicus


Alignment Length:267 Identity:58/267 - (21%)
Similarity:117/267 - (43%) Gaps:31/267 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TGARLRDVCTILNTGPAAYQNQTGGYA-------YDHIIALMRNLDLQDDGIVLNSKIKTIETDF 110
            |.|.||.|..:    |...|::....|       .|.:..::.:  ::::...:::|:.:...:.
  Rat   367 TSAPLRCVLCV----PHTPQDEVAVEASNPQPNKMDRLTEILNS--MRNNSSDVDAKLTSFMEEA 425

  Fly   111 CNIVRDESMLCESMEYLNDKALSDGDTALKFALLFSSRNFDALAMKE-TKVRSAMLKILETNFLN 174
            .|....|.||.|.:..:..||:||...|...|.|....   ||.|.| ||.||.:|.:|:.:|..
  Rat   426 QNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCDKM---ALFMVEGTKFRSLLLNMLQKDFTV 487

  Fly   175 ADAYRLHDKNRLYNSITLLGEYYHRVRLADNTPITIL----GESLLDLL-TRELNDTSVVLGTRI 234
            .:..:..|..|....||.|.|.:..:|.:...|..:|    ...|.:|| ::::.:.:|:..:  
  Rat   488 REELQQQDVERWLGFITFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCS-- 550

  Fly   235 ARLVLSQITLNGEIMRKRHKVEIDLLLFHVRRHLIMQPALTAKVKAMLLMVLDLFYSHFKHIGHD 299
                 .::...|.::.::....:..||...|..::. |:.:...:::||.|::|..:.:..:...
  Rat   551 -----MELQSTGRLLEEQLPEMMTELLASARDKMLC-PSESMLTRSLLLEVIELHANSWNPLTPP 609

  Fly   300 LETMYTN 306
            : |.|.|
  Rat   610 I-TQYYN 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5726NP_611304.1 None
CtifXP_038952934.1 MIF4G 402..602 CDD:397130 46/212 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3942
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23254
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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