DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10916 and rnf126

DIOPT Version :9

Sequence 1:NP_001261070.1 Gene:CG10916 / 37081 FlyBaseID:FBgn0034312 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_031753815.1 Gene:rnf126 / 448402 XenbaseID:XB-GENE-5960892 Length:337 Species:Xenopus tropicalis


Alignment Length:78 Identity:22/78 - (28%)
Similarity:35/78 - (44%) Gaps:11/78 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SEMEGNGGKIAETAPTNDSSPSLNIL---------CAICNEFFRANDIIFSTSRCGHVFHKDCLT 61
            ::.|..|...|:|... .:.|::.|.         |.:|.|.:...:.:.... |.|:||.||:.
 Frog   219 NQFENTGPPPADTEKI-QALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLP-CNHLFHNDCII 281

  Fly    62 RWLNRSRTCPQCR 74
            .||.:..|||.||
 Frog   282 PWLEQHDTCPVCR 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10916NP_001261070.1 zf-RING_2 32..74 CDD:290367 14/41 (34%)
zf-rbx1 <32..74 CDD:289448 14/41 (34%)
DM9 105..183 CDD:128937
DUF3421 133..246 CDD:288732
DM9 186..254 CDD:128937
rnf126XP_031753815.1 zinc_ribbon_9 36..66 CDD:405118
RING-H2_RNF126 252..295 CDD:319715 16/44 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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