DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10916 and Sce

DIOPT Version :9

Sequence 1:NP_001261070.1 Gene:CG10916 / 37081 FlyBaseID:FBgn0034312 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster


Alignment Length:61 Identity:18/61 - (29%)
Similarity:28/61 - (45%) Gaps:4/61 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ILCAICNEFFRANDIIFSTSRCGHVFHKDCL-TRWLNRSRTCPQCRDPCDRRRVHRLYLNF 89
            ::|.||.:..:..   .:|..|.|.|..||: |...:.::.||.||.....:|..|...||
  Fly    44 LMCPICLDMLKKT---MTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNF 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10916NP_001261070.1 zf-RING_2 32..74 CDD:290367 12/42 (29%)
zf-rbx1 <32..74 CDD:289448 12/42 (29%)
DM9 105..183 CDD:128937
DUF3421 133..246 CDD:288732
DM9 186..254 CDD:128937
SceNP_477509.1 RING 45..89 CDD:238093 14/46 (30%)
RAWUL 336..431 CDD:292824
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3349
SonicParanoid 00.000 Not matched by this tool.
21.940

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