DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10916 and spat-3

DIOPT Version :9

Sequence 1:NP_001261070.1 Gene:CG10916 / 37081 FlyBaseID:FBgn0034312 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001024904.2 Gene:spat-3 / 259704 WormBaseID:WBGene00020496 Length:2476 Species:Caenorhabditis elegans


Alignment Length:66 Identity:19/66 - (28%)
Similarity:27/66 - (40%) Gaps:10/66 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CAICNEFFRANDIIFSTSRCGHVFHKDC-LTRWLNRSRTCPQCRDPCDRRRVHRLYLNFAEAPEF 95
            |.:|.|..:.:   ..|.:|||.|...| |..::....|||.||.....:|      ...:.|.|
 Worm   162 CDVCQELIQGS---IMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSKR------ELQQDPRF 217

  Fly    96 D 96
            |
 Worm   218 D 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10916NP_001261070.1 zf-RING_2 32..74 CDD:290367 13/42 (31%)
zf-rbx1 <32..74 CDD:289448 13/42 (31%)
DM9 105..183 CDD:128937
DUF3421 133..246 CDD:288732
DM9 186..254 CDD:128937
spat-3NP_001024904.2 RING-HC_RNF138 158..203 CDD:319458 14/43 (33%)
MSCRAMM_SdrD <290..583 CDD:380149
GREB1 <1301..>1430 CDD:374106
PAT1 <1724..>1845 CDD:370676
DUF1720 2150..>2199 CDD:369766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3349
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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