DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10916 and Rnf2

DIOPT Version :9

Sequence 1:NP_001261070.1 Gene:CG10916 / 37081 FlyBaseID:FBgn0034312 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001347773.1 Gene:Rnf2 / 19821 MGIID:1101759 Length:345 Species:Mus musculus


Alignment Length:68 Identity:18/68 - (26%)
Similarity:29/68 - (42%) Gaps:10/68 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ILCAICNEFFRANDIIFSTSRCGHVFHKDC-LTRWLNRSRTCPQCRDPCDRRRVHRLYLNFAEAP 93
            ::|.||.:..:..   .:|..|.|.|..|| :|...:.::.||.||.....:|      :....|
Mouse    58 LMCPICLDMLKNT---MTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKR------SLRPDP 113

  Fly    94 EFD 96
            .||
Mouse   114 NFD 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10916NP_001261070.1 zf-RING_2 32..74 CDD:290367 12/42 (29%)
zf-rbx1 <32..74 CDD:289448 12/42 (29%)
DM9 105..183 CDD:128937
DUF3421 133..246 CDD:288732
DM9 186..254 CDD:128937
Rnf2NP_001347773.1 RING-HC_RING2 56..102 CDD:319654 14/46 (30%)
RING-HC finger (C3HC4-type) 60..99 CDD:319654 12/41 (29%)
RAWUL_RING2 234..339 CDD:340687
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3349
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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