DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dgp-1 and gtpbp2

DIOPT Version :10

Sequence 1:NP_611302.1 Gene:Dgp-1 / 37080 FlyBaseID:FBgn0027836 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001072714.1 Gene:gtpbp2 / 780171 XenbaseID:XB-GENE-996416 Length:584 Species:Xenopus tropicalis


Alignment Length:584 Identity:265/584 - (45%)
Similarity:375/584 - (64%) Gaps:39/584 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PNGVAVGVGI--------------KSARSNIFNVDGLPQQMAAMSVDYSSIRGKDVLVQPTEEQI 58
            |.|.:.|.|.              :|::||  |...||.:....:::|     |..||.|::.:.
 Frog    11 PAGGSGGTGARGKTKGKKAGKGRGRSSKSN--NPPYLPPEAEEGNIEY-----KLKLVNPSQYRF 68

  Fly    59 ELLQKRLQDRIADNCGETIYEIGVGEDGSDSGLNPEQFEASVATLHLLAANIDADVVKLRERRAE 123
            |.|..:::.|:.:..||.:|:|||.::|...||:.|:.:||:.|||.:|..:.||:..||||..:
 Frog    69 EHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLSEEEMKASLHTLHRMAEKVGADITVLREREVD 133

  Fly   124 KGQSA-----QFLIRKHIDTTDFMEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGHARQRLFRHK 183
            ....:     :.||||..|...|:::||||:||||:||||||||||.||||||||.||..||||.
 Frog   134 YDSDSPRKITEVLIRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHL 198

  Fly   184 HEIESGRTSSVGNDILGFDGVGNVVNKPDHGHLDWVKICENSAKVITFIDLAGHERYLKTTVFGM 248
            |||:||||||:..:||||:..|.|:|..:....:  :|||:::|:|||||||||.:|||||:||:
 Frog   199 HEIQSGRTSSISFEILGFNSKGEVINYSESRTAE--QICESASKMITFIDLAGHHKYLKTTIFGL 261

  Fly   249 TGHAPDFGMLMIGANAGIIGMTKEHLGLALALAVPVFVVVTKIDMCPANVLQENMKLLFKMLKSQ 313
            |.:.|||.||::.||.||.|.|:||||||:||.||.|:||:|:|:|.|..::..::.|.:.||..
 Frog   262 TSYCPDFAMLVVSANTGIAGTTREHLGLAMALKVPFFLVVSKVDLCAAATVERTLRQLERTLKQP 326

  Fly   314 GCRKVPVVVRSHDDVVLSATNFV-SERLCPIFQVSNVTGDNLELLKMFLNLLSTRMPGSE----- 372
            ||.|||.:|||.||.|.:|..|. |..:.|||.:|:|||::|:|||:|||:|.......|     
 Frog   327 GCNKVPFMVRSEDDAVTAAQQFAQSPNITPIFAISSVTGESLDLLKVFLNILPPLTNSHEQEELM 391

  Fly   373 -SLPAEFQIDDVYAVPGVGTVVSGTCLQGTIRLNDCLMLGPDAVGSFVPITIKSIHRKRMNVARV 436
             .|| |||:|::|.||.|||||.||...|..:..:.|::||...|.|:|:.:.||.|.|.....:
 Frog   392 QQLP-EFQVDEIYTVPEVGTVVGGTLYSGVCKEGEHLVVGPTDGGGFLPLKVCSIQRNRSTCRVL 455

  Fly   437 RCGQTASFALKKIKRAYLRKGMVMVSQDLKPQACWEFEGEILVLHHPTTISARYQAMVHCGSIRQ 501
            |.||.|:.||.:.:|:.||||||:||.:..|..||.||.||::|.|.|:.....|..||.|::||
 Frog   456 RAGQAATLALGEFERSLLRKGMVLVSPEALPTVCWVFEAEIVLLFHATSCRQGVQVTVHVGNVRQ 520

  Fly   502 TASIIHM-SRDCLRTGDKAHVKFRFIKQPEYIRAGQRLVFREGRTKAVGNI--LRPLPNAAASP 562
            ||.:.|: .:|.||||:||.|:|||||.|||::.|.:|:||||.||.:|::  |:.:..|...|
 Frog   521 TAVLEHIHGKDELRTGEKAVVRFRFIKHPEYLKPGTKLLFREGMTKGIGHVCSLQVIATAIGDP 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dgp-1NP_611302.1 GTPBP1 55..556 CDD:444076 248/515 (48%)
dermokine <561..>651 CDD:455732 1/2 (50%)
gtpbp2NP_001072714.1 GTPBP1_like 160..380 CDD:206728 129/221 (58%)
GTPBP_II 395..481 CDD:293895 39/86 (45%)
GTPBP_III 487..574 CDD:294007 43/86 (50%)

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