DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dgp-1 and gtpbp1

DIOPT Version :9

Sequence 1:NP_611302.1 Gene:Dgp-1 / 37080 FlyBaseID:FBgn0027836 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001072172.1 Gene:gtpbp1 / 594925 XenbaseID:XB-GENE-951182 Length:666 Species:Xenopus tropicalis


Alignment Length:636 Identity:393/636 - (61%)
Similarity:469/636 - (73%) Gaps:32/636 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NVDGLPQQMAAMSVDYSSIRGKDVLVQPTEEQIELLQKRLQDRIADNCGETIYEIGVGEDGSDSG 90
            ::||.|.:.....:|.:|   |.|||.|:.||.:.|.::|:||:.:..|||||.||.|.||::.|
 Frog    35 SLDGEPLRNGEADIDLTS---KLVLVSPSAEQYDSLLRQLRDRMDEGRGETIYVIGQGSDGTEYG 96

  Fly    91 LNPEQFEASVATLHLLAANIDADVVKLRERRAEKGQSAQFLIRKHIDTTDFMEIRVAVVGNVDAG 155
            ||....||||||:..:|..|.||::.|||.:...|:...:|:||.:...||:|:|||||||||||
 Frog    97 LNEADMEASVATVTSMAEQIIADMILLREHQEAGGKVRDYLVRKSVGDNDFLEVRVAVVGNVDAG 161

  Fly   156 KSTLLGVLTHGELDNGRGHARQRLFRHKHEIESGRTSSVGNDILGFDGVGNVVNKPDH--GHLDW 218
            ||||||||||||||||||.|||:||||||||||||||||||||||||..|.||||||.  |.|:|
 Frog   162 KSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSHGQVVNKPDSHGGSLEW 226

  Fly   219 VKICENSAKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIIGMTKEHLGLALALAVP 283
            .||||.|:|:||||||||||:||||||||||||.|||.|||:|:||||:|||||||||||||.||
 Frog   227 TKICEKSSKIITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVP 291

  Fly   284 VFVVVTKIDMCPANVLQENMKLLFKMLKSQGCRKVPVVVRSHDDVVLSATNFVSERLCPIFQVSN 348
            ||||||||||||||:|||.:|||.::|||.||||:||:|::.|||:::|:||.|||:|||||:||
 Frog   292 VFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQISN 356

  Fly   349 VTGDNLELLKMFLNLLSTRMPGSESLPAEFQIDDVYAVPGVGTVVSGTCLQGTIRLNDCLMLGPD 413
            |||:|:|||||||||||.|....|..||||||||.|:|||||||||||.|:|.|:|||.|:||||
 Frog   357 VTGENMELLKMFLNLLSPRSSSREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDLLLLGPD 421

  Fly   414 AVGSFVPITIKSIHRKRMNVARVRCGQTASFALKKIKRAYLRKGMVMVSQDLKPQACWEFEGEIL 478
            .:|:|..|.:||||||||.|..||.|||||||||||||:.:||||||||..|.|||.||||.|||
 Frog   422 PLGNFTSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEIL 486

  Fly   479 VLHHPTTISARYQAMVHCGSIRQTASIIHMSRDCLRTGDKAHVKFRFIKQPEYIRAGQRLVFREG 543
            |||||||||.|||||||||||||||:|:.||||||||||||.|.|||||.|||:...||||||||
 Frog   487 VLHHPTTISPRYQAMVHCGSIRQTATILSMSRDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREG 551

  Fly   544 RTKAVGNILRPLPNAAASPYRPKPAKMQSRSHNGGSNGSNNQH-----------RQQGQGSSSGA 597
            ||||||.|.:.|.:....|...||.:::.:|.....:|..::.           .....|.::||
 Frog   552 RTKAVGTITKLLQSTNNLPMNSKPQQVKMQSTKKSPHGKKDEQIPGAAVPEEASPSAAVGVTAGA 616

  Fly   598 G-------------CSKDNADEKQNGDKREGGSRRGGKRKRNNRPT-PSGG 634
            |             |..:|..:...|.:|.||.|.  |.|.....| |:||
 Frog   617 GSLQAQTASAEDFQCRAENKPKTGGGGRRRGGQRH--KVKSQGACTAPTGG 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dgp-1NP_611302.1 GTPBP1 38..555 CDD:227583 367/518 (71%)
GTPBP1_like 145..367 CDD:206728 181/223 (81%)
GTPBP_II 376..462 CDD:293895 63/85 (74%)
GTPBP_III 468..553 CDD:294007 70/84 (83%)
gtpbp1NP_001072172.1 SelB 65..563 CDD:332589 358/497 (72%)
GTPBP1_like 151..375 CDD:206728 181/223 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 370 1.000 Domainoid score I894
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3165
Inparanoid 1 1.050 747 1.000 Inparanoid score I578
OMA 1 1.010 - - QHG62195
OrthoDB 1 1.010 - - D305827at33208
OrthoFinder 1 1.000 - - FOG0002013
OrthoInspector 1 1.000 - - oto104961
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2451
SonicParanoid 1 1.000 - - X4471
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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