DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dgp-1 and gtpbp1

DIOPT Version :10

Sequence 1:NP_611302.1 Gene:Dgp-1 / 37080 FlyBaseID:FBgn0027836 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001072172.1 Gene:gtpbp1 / 594925 XenbaseID:XB-GENE-951182 Length:666 Species:Xenopus tropicalis


Alignment Length:636 Identity:393/636 - (61%)
Similarity:469/636 - (73%) Gaps:32/636 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NVDGLPQQMAAMSVDYSSIRGKDVLVQPTEEQIELLQKRLQDRIADNCGETIYEIGVGEDGSDSG 90
            ::||.|.:.....:|.:|   |.|||.|:.||.:.|.::|:||:.:..|||||.||.|.||::.|
 Frog    35 SLDGEPLRNGEADIDLTS---KLVLVSPSAEQYDSLLRQLRDRMDEGRGETIYVIGQGSDGTEYG 96

  Fly    91 LNPEQFEASVATLHLLAANIDADVVKLRERRAEKGQSAQFLIRKHIDTTDFMEIRVAVVGNVDAG 155
            ||....||||||:..:|..|.||::.|||.:...|:...:|:||.:...||:|:|||||||||||
 Frog    97 LNEADMEASVATVTSMAEQIIADMILLREHQEAGGKVRDYLVRKSVGDNDFLEVRVAVVGNVDAG 161

  Fly   156 KSTLLGVLTHGELDNGRGHARQRLFRHKHEIESGRTSSVGNDILGFDGVGNVVNKPDH--GHLDW 218
            ||||||||||||||||||.|||:||||||||||||||||||||||||..|.||||||.  |.|:|
 Frog   162 KSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSHGQVVNKPDSHGGSLEW 226

  Fly   219 VKICENSAKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIIGMTKEHLGLALALAVP 283
            .||||.|:|:||||||||||:||||||||||||.|||.|||:|:||||:|||||||||||||.||
 Frog   227 TKICEKSSKIITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVP 291

  Fly   284 VFVVVTKIDMCPANVLQENMKLLFKMLKSQGCRKVPVVVRSHDDVVLSATNFVSERLCPIFQVSN 348
            ||||||||||||||:|||.:|||.::|||.||||:||:|::.|||:::|:||.|||:|||||:||
 Frog   292 VFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQISN 356

  Fly   349 VTGDNLELLKMFLNLLSTRMPGSESLPAEFQIDDVYAVPGVGTVVSGTCLQGTIRLNDCLMLGPD 413
            |||:|:|||||||||||.|....|..||||||||.|:|||||||||||.|:|.|:|||.|:||||
 Frog   357 VTGENMELLKMFLNLLSPRSSSREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDLLLLGPD 421

  Fly   414 AVGSFVPITIKSIHRKRMNVARVRCGQTASFALKKIKRAYLRKGMVMVSQDLKPQACWEFEGEIL 478
            .:|:|..|.:||||||||.|..||.|||||||||||||:.:||||||||..|.|||.||||.|||
 Frog   422 PLGNFTSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEIL 486

  Fly   479 VLHHPTTISARYQAMVHCGSIRQTASIIHMSRDCLRTGDKAHVKFRFIKQPEYIRAGQRLVFREG 543
            |||||||||.|||||||||||||||:|:.||||||||||||.|.|||||.|||:...||||||||
 Frog   487 VLHHPTTISPRYQAMVHCGSIRQTATILSMSRDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREG 551

  Fly   544 RTKAVGNILRPLPNAAASPYRPKPAKMQSRSHNGGSNGSNNQH-----------RQQGQGSSSGA 597
            ||||||.|.:.|.:....|...||.:::.:|.....:|..::.           .....|.::||
 Frog   552 RTKAVGTITKLLQSTNNLPMNSKPQQVKMQSTKKSPHGKKDEQIPGAAVPEEASPSAAVGVTAGA 616

  Fly   598 G-------------CSKDNADEKQNGDKREGGSRRGGKRKRNNRPT-PSGG 634
            |             |..:|..:...|.:|.||.|.  |.|.....| |:||
 Frog   617 GSLQAQTASAEDFQCRAENKPKTGGGGRRRGGQRH--KVKSQGACTAPTGG 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dgp-1NP_611302.1 GTPBP1 55..556 CDD:444076 360/502 (72%)
dermokine <561..>651 CDD:455732 22/99 (22%)
gtpbp1NP_001072172.1 GTPBP1 66..563 CDD:444076 358/496 (72%)
GTPBP1_like 151..375 CDD:206728 181/223 (81%)

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