DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dgp-1 and gtpbp1l

DIOPT Version :9

Sequence 1:NP_611302.1 Gene:Dgp-1 / 37080 FlyBaseID:FBgn0027836 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_005161751.1 Gene:gtpbp1l / 402863 ZFINID:ZDB-GENE-041007-2 Length:647 Species:Danio rerio


Alignment Length:608 Identity:387/608 - (63%)
Similarity:460/608 - (75%) Gaps:23/608 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DYSSIRGKDVLVQPTEEQIELLQKRLQDRIADNCGETIYEIGVGEDGSDSGLNPEQFEASVATLH 104
            |:..:..|..||.||.||.:.|||:|::||.:.||||||.||:|.||.|.||:....||||||:.
Zfish    54 DHLDLTSKFALVSPTGEQYDCLQKQLRERIEEGCGETIYVIGMGTDGGDYGLDERDMEASVATVQ 118

  Fly   105 LLAANIDADVVKLRERRAEKGQSAQFLIRKHIDTTDFMEIRVAVVGNVDAGKSTLLGVLTHGELD 169
            .|...::||::.||||....|:...:|||:.:...||:|:|||||||||||||||||||||||||
Zfish   119 SLCEQVEADLILLRERMETAGRVRDYLIRRRVGEADFLEVRVAVVGNVDAGKSTLLGVLTHGELD 183

  Fly   170 NGRGHARQRLFRHKHEIESGRTSSVGNDILGFDGVGNVVNKPDH--GHLDWVKICENSAKVITFI 232
            ||||.|||:|||||||:||||||||||||||||..|.||||||.  |.|||.||||.|:||||||
Zfish   184 NGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQEGQVVNKPDSHGGSLDWTKICERSSKVITFI 248

  Fly   233 DLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIIGMTKEHLGLALALAVPVFVVVTKIDMCPAN 297
            ||||||:||||||||||||.|||.|||:|:||||:|||||||||||||.||||||||||||||||
Zfish   249 DLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPAN 313

  Fly   298 VLQENMKLLFKMLKSQGCRKVPVVVRSHDDVVLSATNFVSERLCPIFQVSNVTGDNLELLKMFLN 362
            :|||.:|||.::|||.||||:||:|::.|||:::|:||.|||:|||||:|||||:|::|||||||
Zfish   314 ILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQISNVTGENMDLLKMFLN 378

  Fly   363 LLSTRMPGSESLPAEFQIDDVYAVPGVGTVVSGTCLQGTIRLNDCLMLGPDAVGSFVPITIKSIH 427
            |||.|....:..|.||||||.|:|||||||||||.|:|.|||||.|:||||.:|.|:||.:||||
Zfish   379 LLSPRTSYKDDEPPEFQIDDTYSVPGVGTVVSGTTLRGLIRLNDTLLLGPDPLGVFIPIAVKSIH 443

  Fly   428 RKRMNVARVRCGQTASFALKKIKRAYLRKGMVMVSQDLKPQACWEFEGEILVLHHPTTISARYQA 492
            ||||.|..||.||||||:||||||:.:||||||||..|.||||||||.||||||||||||.||||
Zfish   444 RKRMPVKEVRGGQTASFSLKKIKRSSIRKGMVMVSPRLNPQACWEFEAEILVLHHPTTISPRYQA 508

  Fly   493 MVHCGSIRQTASIIHMSRDCLRTGDKAHVKFRFIKQPEYIRAGQRLVFREGRTKAVGNI---LRP 554
            |||||||||||:||.|:::||||||||.|.|||||.|||:.:.||||||||||||||:|   |:.
Zfish   509 MVHCGSIRQTATIIGMNKECLRTGDKAAVHFRFIKTPEYLHSDQRLVFREGRTKAVGSITKLLQS 573

  Fly   555 LPNAAASPYRPKPAKMQSRSHNGGSNGSNNQHRQQGQGSSSGAGCSKDNADEKQNGDKREGGSRR 619
            .|.|.....:..|:::::.|.....|.:.....:.||...||.                 .|.||
Zfish   574 KPQAKMQSSKKPPSQVEASSSPTDENTNTGGSPETGQLPKSGG-----------------SGRRR 621

  Fly   620 GGKRKRNNRPTPSGGVGVDPSNG 642
            ||.|.: .:...||.....|:.|
Zfish   622 GGHRHK-GKSALSGAASTTPATG 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dgp-1NP_611302.1 GTPBP1 38..555 CDD:227583 368/519 (71%)
GTPBP1_like 145..367 CDD:206728 181/223 (81%)
GTPBP_II 376..462 CDD:293895 63/85 (74%)
GTPBP_III 468..553 CDD:294007 69/87 (79%)
gtpbp1lXP_005161751.1 GTPBP1 75..571 CDD:227583 359/495 (73%)
GTPBP1_like 159..383 CDD:206728 181/223 (81%)
GTPBP_II 392..478 CDD:293895 63/85 (74%)
GTPBP_III 484..570 CDD:294007 69/85 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595680
Domainoid 1 1.000 371 1.000 Domainoid score I850
eggNOG 1 0.900 - - E1_COG5258
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3165
Inparanoid 1 1.050 764 1.000 Inparanoid score I526
OMA 1 1.010 - - QHG62195
OrthoDB 1 1.010 - - D305827at33208
OrthoFinder 1 1.000 - - FOG0002013
OrthoInspector 1 1.000 - - otm25300
orthoMCL 1 0.900 - - OOG6_100969
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4471
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.810

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