DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dgp-1 and eEFSec

DIOPT Version :10

Sequence 1:NP_611302.1 Gene:Dgp-1 / 37080 FlyBaseID:FBgn0027836 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_611584.1 Gene:eEFSec / 37444 FlyBaseID:FBgn0034627 Length:511 Species:Drosophila melanogaster


Alignment Length:398 Identity:93/398 - (23%)
Similarity:161/398 - (40%) Gaps:65/398 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 MEIRVAVVGNVDAGKSTLLGVLTH----GELDNGRGHARQRLFRHKHEIESGRTSSVGNDILGFD 202
            :...:.::|:||:||:||...|:.    ...|           ::...:|.|.|..     |||.
  Fly     3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFD-----------KNPQSVERGITLD-----LGFS 51

  Fly   203 GVGNVVNKPDHGHLDWVKICENSAKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGII 267
            |:  :|:.|.|       :.:......||:|..||...::|.:.|  ....|..:|::.|..|..
  Fly    52 GL--LVDAPAH-------LPQGEQLQFTFVDCPGHASLIRTIIGG--AQIIDLMLLVVDAQKGKQ 105

  Fly   268 GMTKEHLGLALALAVPVFVVVTKIDMCPANVLQENM-KLLFKMLKSQGCRKVPVVVRSHDDVVLS 331
            ..|.|.|.:...|...:.||:.|||:.|.|.....: ||..::.|:                 |.
  Fly   106 TQTAECLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT-----------------LE 153

  Fly   332 ATNFVSERLCPIFQVSNVTGDNLELLKMFLNLLSTRMPGSESLPAEFQIDDVYAVPGVGTVVSGT 396
            ||.|..:  .||..||.:.|.::..|:..|.....:...:.:.|....:|..:.:.|.|||.:||
  Fly   154 ATTFGGQ--VPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGT 216

  Fly   397 CLQGTIRLNDCLMLGPDAVGSFVPITIKSIHRKRMNVARVRCGQTASFALKKIKRAYLRKGMVMV 461
            .|||.:::|:.:.|  .|:|.  ...:|||...|.||.....|......:.:.....|.:|::..
  Fly   217 LLQGKVQVNNVIEL--PALGE--QRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAKLLERGIITQ 277

  Fly   462 SQDLKP--QACWEFEGEILVLHHPTTISARYQAMVHCGSIRQTASIIHMSRDCLRTGDKAHVKFR 524
            ...|||  ..|.:|:.   :.::...|.:..:..:..|.....|::     ...|..|.....|:
  Fly   278 PGYLKPIYAVCLQFKP---IRYYKEVIKSMRKMHISVGHNTVMANV-----TLFRDTDGTTSTFQ 334

  Fly   525 FIKQPEYI 532
            ..|:.||:
  Fly   335 LDKEYEYM 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dgp-1NP_611302.1 GTPBP1 55..556 CDD:444076 93/398 (23%)
dermokine <561..>651 CDD:455732
eEFSecNP_611584.1 SelB_euk 5..192 CDD:206676 55/232 (24%)
SelB_II 196..278 CDD:293897 23/85 (27%)
eSelB_III 283..396 CDD:294009 12/68 (18%)
Blue background indicates that the domain is not in the aligned region.

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