DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dgp-1 and eEF2

DIOPT Version :9

Sequence 1:NP_611302.1 Gene:Dgp-1 / 37080 FlyBaseID:FBgn0027836 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster


Alignment Length:491 Identity:86/491 - (17%)
Similarity:167/491 - (34%) Gaps:142/491 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 VAVVGNVDAGKSTLLGVLTHGELDNGRGHARQRLFRHKHEIESGRTSSVGNDILGF-------DG 203
            ::|:.:||.|||||...|...........|.:..|....:.|..|..::.:..:..       |.
  Fly    22 MSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKSTAISMYFEVEEKDL 86

  Fly   204 VGNVVNKPDHGHLDWVKICENSAKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIIG 268
            |  .:..||...    |.|:..  :|..||..||..:.......:  ...|..::::...:|:..
  Fly    87 V--FITHPDQRE----KECKGF--LINLIDSPGHVDFSSEVTAAL--RVTDGALVVVDCVSGVCV 141

  Fly   269 MTKEHLGLALALAVPVFVVVTKIDMCPANVLQENMKLLFKMLKSQGCRKVPVVVRSHDDVVLSAT 333
            .|:..|..|:|..:...:.:.|:|..... ||.:.:.|::..: :....|.|::.:::|   ...
  Fly   142 QTETVLRQAIAERIKPILFMNKMDRALLE-LQLDAEELYQTFQ-RIVENVNVIIATYND---DGG 201

  Fly   334 NFVSERLCP--------------IFQVSNVTGDNLELLKMFLNLLSTRMPGSESLPAE------- 377
            .....|:.|              .|.:...:....|..|:.:..|..|:.|.....|:       
  Fly   202 PMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKFKIDVVKLMNRLWGENFFNAKTKKWQKQ 266

  Fly   378 -----------FQIDDVYAVPGVGTVVSGTCLQGTIRLNDCLM-LGPDAVGSF---VPITIKSIH 427
                       :.:|.:|                  ::.|.:| ...:.:|:.   :.:|:|...
  Fly   267 KEADNKRSFCMYILDPIY------------------KVFDAIMNYKKEEIGTLLEKIGVTLKHED 313

  Fly   428 RKRMNVARVRCGQTASFALKKIKRAYLRKGMVMVSQDLKPQACWEFEGEILVLHHPTTISA-RYQ 491
            :.:...|          .||.:.|.:|..|..::              :::.:|.|:.:.| :|:
  Fly   314 KDKDGKA----------LLKTVMRTWLPAGEALL--------------QMIAIHLPSPVVAQKYR 354

  Fly   492 -AMVHCGSIRQTASIIHMSRD-----------CLRTGDKAHV---------------KFRFI--- 526
             .|::.|.....|:|...|.|           .:.|.||...               |.|.:   
  Fly   355 MEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVATGQKCRIMGPN 419

  Fly   527 -----KQPEYIRAGQRLVFREGR-TKAV-----GNI 551
                 |:..|.:|.||.:...|| .:|:     |||
  Fly   420 YTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNI 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dgp-1NP_611302.1 GTPBP1 38..555 CDD:227583 86/491 (18%)
GTPBP1_like 145..367 CDD:206728 44/241 (18%)
GTPBP_II 376..462 CDD:293895 14/107 (13%)
GTPBP_III 468..553 CDD:294007 26/126 (21%)
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 86/491 (18%)
EF2 20..236 CDD:206672 41/228 (18%)
EF2_snRNP_like_II 380..474 CDD:293901 16/76 (21%)
EF2_snRNP_III 489..560 CDD:293918
aeEF2_snRNP_like_IV 560..732 CDD:238839
eEF2_snRNP_like_C 728..807 CDD:239763
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464682
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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