DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dgp-1 and Gtpbp1

DIOPT Version :9

Sequence 1:NP_611302.1 Gene:Dgp-1 / 37080 FlyBaseID:FBgn0027836 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_038846.2 Gene:Gtpbp1 / 14904 MGIID:109443 Length:668 Species:Mus musculus


Alignment Length:633 Identity:393/633 - (62%)
Similarity:470/633 - (74%) Gaps:35/633 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VDGLPQQMAAMSVDYSSIRGKDVLVQPTEEQIELLQKRLQDRIADNCGETIYEIGVGEDGSDSGL 91
            ::|.|:      :|.:|   |.|||.||.||.:.|.:::.:|:.:.||||||.||.|.||::.||
Mouse    53 LNGEPE------LDLTS---KLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGL 108

  Fly    92 NPEQFEASVATLHLLAANIDADVVKLRERRAEKGQSAQFLIRKHIDTTDFMEIRVAVVGNVDAGK 156
            :....|||.||:..:|..|:|||:.||||:...|:...:|:||.:...||:|:||||||||||||
Mouse   109 SEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGK 173

  Fly   157 STLLGVLTHGELDNGRGHARQRLFRHKHEIESGRTSSVGNDILGFDGVGNVVNKPDH--GHLDWV 219
            |||||||||||||||||.|||:||||||||||||||||||||||||..||||||||.  |.|:|.
Mouse   174 STLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWT 238

  Fly   220 KICENSAKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIIGMTKEHLGLALALAVPV 284
            ||||.|:||||||||||||:||||||||||||.|||.|||:|:||||:|||||||||||||.|||
Mouse   239 KICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPV 303

  Fly   285 FVVVTKIDMCPANVLQENMKLLFKMLKSQGCRKVPVVVRSHDDVVLSATNFVSERLCPIFQVSNV 349
            |||||||||||||:|||.:|||.::|||.||||:||:|:|.|||:::|:||.|||:|||||:|||
Mouse   304 FVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNV 368

  Fly   350 TGDNLELLKMFLNLLSTRMPGSESLPAEFQIDDVYAVPGVGTVVSGTCLQGTIRLNDCLMLGPDA 414
            ||:||:||||||||||.|....|..||||||||.|:|||||||||||.|:|.|:|||.|:||||.
Mouse   369 TGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDP 433

  Fly   415 VGSFVPITIKSIHRKRMNVARVRCGQTASFALKKIKRAYLRKGMVMVSQDLKPQACWEFEGEILV 479
            :|:|:.|.:||||||||.|..||.|||||||||||||:.:||||||||..|.|||.||||.||||
Mouse   434 LGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILV 498

  Fly   480 LHHPTTISARYQAMVHCGSIRQTASIIHMSRDCLRTGDKAHVKFRFIKQPEYIRAGQRLVFREGR 544
            ||||||||.|||||||||||||||:|:.|.:|||||||||.|.|||||.|||:...|||||||||
Mouse   499 LHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGR 563

  Fly   545 TKAVGNILRPLPNAAASPYRPKPAKMQSRSHNGGSNGSNNQHRQQG---------------QGSS 594
            |||||.|.:.|.....||...||.:::.:|...|....    |::|               :.||
Mouse   564 TKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLSK----REEGGPCGVPAAGGPPTGDEASS 624

  Fly   595 SGAGCSKDNADEKQNGDKREGGSRRGGKRKRNNRPTPSGGVGVDPSNG 642
            .|...:...:..:.......||.||||:|.:     ...|..|.|::|
Mouse   625 LGTAQAASTSGLQPQPKPSSGGRRRGGQRHK-----VKSGACVTPASG 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dgp-1NP_611302.1 GTPBP1 38..555 CDD:227583 368/518 (71%)
GTPBP1_like 145..367 CDD:206728 184/223 (83%)
GTPBP_II 376..462 CDD:293895 63/85 (74%)
GTPBP_III 468..553 CDD:294007 68/84 (81%)
Gtpbp1NP_038846.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
GTPBP1 48..574 CDD:227583 370/529 (70%)
GTPBP1_like 162..386 CDD:206728 184/223 (83%)
G1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 167..174 6/6 (100%)
G2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 206..210 3/3 (100%)
G3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 252..255 2/2 (100%)
G4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 308..311 2/2 (100%)
G5. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 366..368 1/1 (100%)
GTPBP_II 395..481 CDD:293895 63/85 (74%)
GTPBP_III 487..573 CDD:294007 68/85 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 573..668 23/104 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849873
Domainoid 1 1.000 375 1.000 Domainoid score I866
eggNOG 1 0.900 - - E1_COG5258
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3165
Inparanoid 1 1.050 751 1.000 Inparanoid score I569
Isobase 1 0.950 - 0 Normalized mean entropy S1965
OMA 1 1.010 - - QHG62195
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002013
OrthoInspector 1 1.000 - - oto94763
orthoMCL 1 0.900 - - OOG6_100969
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2451
SonicParanoid 1 1.000 - - X4471
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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