DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup75 and AT4G32910

DIOPT Version :9

Sequence 1:NP_611300.2 Gene:Nup75 / 37078 FlyBaseID:FBgn0034310 Length:668 Species:Drosophila melanogaster
Sequence 2:NP_567908.1 Gene:AT4G32910 / 829427 AraportID:AT4G32910 Length:716 Species:Arabidopsis thaliana


Alignment Length:733 Identity:145/733 - (19%)
Similarity:280/733 - (38%) Gaps:151/733 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CGNTLTGVFVPGSRIALSAYRHVTHSSRDEPTENAGQVPVLIYMAQESTLFDEPVLRSVLAEANA 83
            |||.|....:....:            ||:.....|...|.:.::.|.....:|..|.:...:.:
plant    45 CGNNLRVTVLRNPEL------------RDDDDGEVGGKVVNVRLSGEDGEISDPQWRRIAYGSVS 97

  Fly    84 TFATLQQLGSRATRA---------------EYV-NISRAYRSIVRS-------CLEKLEQAKKSP 125
            .||.||...:..:..               ||| ..||..:|::.:       .:|......|:.
plant    98 PFALLQSRRNSISSLSKMDMSSSLYQTAWWEYVMEYSRDIKSLLSNTISLPAPLIEDPRSVIKNA 162

  Fly   126 EVQTDEARLQRLCDAIVVFYAAECLWHLFEILYIQSNQL--VVPQLLDWARFHS-------PHAE 181
            |..|                :.:..|.|.|:.|.....|  :..:|:||...:.       |...
plant   163 EEPT----------------SLKAAWELMELFYADKTCLSWLPERLVDWLSEYDILLSSSHPTIY 211

  Fly   182 DRATDLL--LMGEEASESDD-YWSIVKSLIMLGEIDVTRAVLS----------QNRKAGQTSFKA 233
            .:..|..  |:|.:|.|.|. ||.::.|.:.:|.:::...:|.          .:|:......:|
plant   212 SKLQDFQKELVGLQAIEDDPRYWEVMASALSVGWLEIVVKLLHLHGSYQLDQLGHRETENGLVEA 276

  Fly   234 AEQILKSMPVYQEGYALQKF-------------HSQWE----------FWHVDTERKIQSGLFAT 275
            ...::..||..:......||             ..:|:          ||       :|.....|
plant   277 VAVLISKMPRMRPQLEDGKFGECSAAKPDFMKTRERWQSQITKLECSAFW-------VQCAHHQT 334

  Fly   276 EPELEQLIRLVAGDSEQWDAGIKESQDFYEYLPGYLLFTKPTCKPFE-LKIAAAKWLNRWCLLRP 339
            ...|..:::::.|:::...|.   :.::.|....:||:.:|..|..: :...|.|.:..    :|
plant   335 REGLRNMLKIMIGNADCLRAA---TCNWMELFVSHLLYLRPFTKGLDGMHSLAQKCVQS----KP 392

  Fly   340 EREQCSMNRMVSQLMDHDLRLFIYDAQKLNDTHWFSTHLIDLI---HHCGQLKSYFDQ---NNID 398
            ......:.|::..::..:..:.:.:..| ....|...|.::|:   ...|::..:.:|   ..|:
plant   393 VNTSHKLLRLLIGILGENTEVVLAECSK-EFGSWMVAHAMELLTAGSEEGEVLVHEEQRKLGGIN 456

  Fly   399 LPALRHSMIYEYGSYLMTSHNM-WQLGIDYLDCCKQEGQAAIELLLPRITLRSERQATKLINLAR 462
            :..| |.::|   :.:::||.: ||:...||..|:::|...:|||..|..::..:...|.:.:.|
plant   457 MEEL-HRLVY---AQVLSSHALTWQIAPIYLASCEKQGLGLLELLFYRQPVQENQMLIKSLEICR 517

  Fly   463 QRGLISVEREICKVLSKRSYDNERYGNALEWAIRSKDVLLVTAVA----DFILKHYSKTGCMLCP 523
            ...|.:|..::.|:.....:.:.|.|:.:.|..:::|...::.:|    |.:.|..|........
plant   518 LYELSNVSAKLMKISGVHHWKHGRKGSGIFWLQQARDENCLSVIAQQLFDSVGKSLSDESLKQWE 582

  Fly   524 DTIANVGGRMFASPRLVFLSKYFEFYEFY------RTRDFL-SASELLVNLLESKITPDYFWPSL 581
            ..:..:|.....|..|.||.||.:|....      :|.|.. .|.|.||:|::|..||..||..|
plant   583 GLVELLGSESQISGGLDFLHKYRDFKRSLKVVHDGKTIDAAHEAVERLVSLMKSPSTPQRFWLPL 647

  Fly   582 LIDSMPLLESKDPKIFAKETVAILHHIETDLV--PIIERDVSKYGKHHTETVFKDYRVENVDEIM 644
            |.||:.||...:.        ::|:..:|:|:  .:.|..:::......|:......|.:|    
plant   648 LHDSLKLLNWPER--------SLLNVTQTNLMLNKLQELSIARLRPGFIESELSAQAVGSV---- 700

  Fly   645 NLLRLACARNLARALIIE 662
               |||.|.||.||.:.|
plant   701 ---RLALATNLGRAFLEE 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup75NP_611300.2 Nucleopor_Nup85 59..610 CDD:311504 122/637 (19%)
AT4G32910NP_567908.1 Nucleopor_Nup85 73..677 CDD:400113 124/646 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 76 1.000 Domainoid score I3171
eggNOG 1 0.900 - - E1_KOG2271
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11755
Inparanoid 1 1.050 79 1.000 Inparanoid score I2391
OMA 1 1.010 - - QHG58410
OrthoDB 1 1.010 - - D588551at2759
OrthoFinder 1 1.000 - - FOG0003500
OrthoInspector 1 1.000 - - oto3996
orthoMCL 1 0.900 - - OOG6_104020
Panther 1 1.100 - - LDO PTHR13373
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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