DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nup75 and nup85

DIOPT Version :9

Sequence 1:NP_611300.2 Gene:Nup75 / 37078 FlyBaseID:FBgn0034310 Length:668 Species:Drosophila melanogaster
Sequence 2:NP_001003625.1 Gene:nup85 / 445231 ZFINID:ZDB-GENE-040801-145 Length:649 Species:Danio rerio


Alignment Length:657 Identity:206/657 - (31%)
Similarity:341/657 - (51%) Gaps:58/657 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PGSRIALSA-YRHVTHSSRDEPTENAGQVPVLIYMAQESTLFDEPVLRSVLAEANATFATLQQL- 91
            ||..:.... |:....||...|         |:::.::......|:||.:..|::..|..||:: 
Zfish    29 PGDLLVYETNYKLRGSSSAGSP---------LVHVVRKDEDICSPILRKLFNESHLIFMGLQKIK 84

  Fly    92 ---GSRATRAEYVNISRAYRSIVRSCLEKLEQAKKSPEVQTDEARLQRLCDAIVVFYAAECLWHL 153
               .|:..:.::|:|||.|||::|:|:|:|:|...:.:   |.:...:..|.:.:..|.|.:|:|
Zfish    85 EDAPSKNKKTQFVSISRNYRSVIRACMEELQQNAVTAQ---DGSLASQYGDQVSILLAIELIWNL 146

  Fly   154 FEILYIQ---SNQLVVPQLLDWARFHSPHAEDRATDLLLMGEEASESDDYWSIVKSLIMLGEIDV 215
            .|:|:|:   :..|:: .||:|.|.|....:.||.: :|..|..::...||.:|.||::.|.:|.
Zfish   147 CEVLFIEAAPAGSLLL-HLLNWVRLHKSDVDTRARE-VLQSENPTQHPAYWDVVTSLVLQGRMDE 209

  Fly   216 TRAVLSQN---RKAGQTSFKAAEQILKSMPVYQEGYA--LQKFHSQWEFWHVDTERKIQSGLFAT 275
            .|.:||:.   |....:.||..:.:|::||::....|  |.:|..:|..||.:.:|.:|...||:
Zfish   210 ARQILSKQASLRMESSSVFKRMDTLLQTMPIFNPAGAQTLTEFDVKWRHWHEECDRCLQDHTFAS 274

  Fly   276 EPELEQLIRLVAGDSEQWDAGIKESQD----FYEYLPGYLLFTKPTCKPFELKIAAAKWLNRWCL 336
            ..|||.|.:::.||.:.    |.|.:|    :|.:|...||||.||.||.:|...|...:|.:  
Zfish   275 SAELETLCKILLGDEDV----ILEQKDLMSTWYHFLVSRLLFTHPTIKPPDLHYYAQSSMNMF-- 333

  Fly   337 LRPEREQCSMNRMVSQLMDHDLRLFIYDAQKLNDTHWFSTHLIDLIHHCGQLKS---YFDQNNID 398
            |.|......::.::....:.||...|.|.....:..||..||.||:.||..|:|   :|..|   
Zfish   334 LGPRATPEPLDIILLSAFEFDLHQVIKDCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSN--- 395

  Fly   399 LPALRHSMIYEYGSYLMTSHNMWQLGIDYLDCCKQEGQAAIELLLPRITLRSERQATKLINLARQ 463
               ||..::.||.|.|.|.|::|||.:||||.|.:.|:..:||.:.|:.|.:||:|.|::.:...
Zfish   396 ---LREFLVLEYASGLFTHHSLWQLAVDYLDHCPEFGRVYLELQIERVPLDTERKANKVLRICED 457

  Fly   464 RGLISVEREICKVLSKRSYDNERYGNALEWAIRSKDVLLVTAVADFILKHYSKTGCMLCPDTIAN 528
            |.:....|.|||:::||:..|.|.|:||.|:||:||..|.|.:::..|:.||..|.....|.:.|
Zfish   458 RQMSEQVRSICKIMAKRALRNNRLGSALSWSIRAKDAALATLISERFLQDYSNKGSFTDLDVLDN 522

  Fly   529 VGGRMFASPRLVFLSKYFEFYEFYRTRDFLSASELLVNLLESKITPDYFWPSLLIDSMPLLESKD 593
            :|..|..|.||.||.||.||:..|....|..|::||::|:.:||.|...|.:||.|::||||.::
Zfish   523 LGPAMLLSDRLTFLGKYREFHRLYGENRFSDAAKLLLSLMMAKIAPRSLWMTLLTDALPLLEQEE 587

  Fly   594 PKIFAKETVAILHHIETDLVPIIERDVSKYGKHHTETVFKDYRVENVDEIMNLLRLACARNLARA 658
            ......:|..::..:|.     :........:...|...:..:.|       |||:|.|||||.|
Zfish   588 VIFTVDQTYELMSCLEE-----LNSGTKDSNQMEQEEDLESTKTE-------LLRVALARNLATA 640

  Fly   659 LIIENTL 665
            ::.|.|:
Zfish   641 IVKEGTI 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup75NP_611300.2 Nucleopor_Nup85 59..610 CDD:311504 185/569 (33%)
nup85NP_001003625.1 Nucleopor_Nup85 51..604 CDD:284900 185/569 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 317 1.000 Domainoid score I1240
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11755
Inparanoid 1 1.050 327 1.000 Inparanoid score I2453
OMA 1 1.010 - - QHG58410
OrthoDB 1 1.010 - - D443305at33208
OrthoFinder 1 1.000 - - FOG0003500
OrthoInspector 1 1.000 - - otm26115
orthoMCL 1 0.900 - - OOG6_104020
Panther 1 1.100 - - LDO PTHR13373
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3890
SonicParanoid 1 1.000 - - X4494
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1414.010

Return to query results.
Submit another query.