DRSC/TRiP Functional Genomics Resources

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Protein Alignment Naus and Cttnbp2nl

DIOPT Version :9

Sequence 1:NP_001286565.1 Gene:Naus / 37076 FlyBaseID:FBgn0034308 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001101182.2 Gene:Cttnbp2nl / 310760 RGDID:1310822 Length:638 Species:Rattus norvegicus


Alignment Length:650 Identity:170/650 - (26%)
Similarity:272/650 - (41%) Gaps:172/650 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 ELVKMLYYLEGELQARDVCIAALRNERVKQLIAQLRTKRLQPNDPYAAIFRDKIALNGNLISRES 147
            ||:.:...|||||:|||:.|.||:.:.....|.: |..:...:||..|:.||...|      :|.
  Rat    10 ELLTLFSILEGELEARDLVIEALKAQHRDTFIEE-RYGKYNISDPLMALQRDFETL------KEK 67

  Fly   148 STQAAQAEME-----VRQIIEQQMEQQYQMVSKQRATHVRMVNILTESLENNQRMLQELEEEKRK 207
            :....|....     ::.:::|....|.:|:|:..|...|           :::::.:||||:::
  Rat    68 NDSEKQPVCTNPLSILKAVMKQCKNMQERMLSQLAAAESR-----------HRKVILDLEEERQR 121

  Fly   208 HENTTAQGDDITYGLELERNKLKQDLEEERAQVAKMEKDLKKLQETLEYERNRQKQIVLLLIAER 272
            |...||:|||:||.||.||.:|.|.||.|::||.|.||:.|||...||.||:|.||:..:|:.|.
  Rat   122 HAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLEC 186

  Fly   273 KKILMKYIEEGKRSEDLAQILAEEKQRSDTIAEGLEEESKKSLRMEEELEKQTHAMEQERKVLFA 337
            ||...|..|||:::.:|:..|.:||.|:..:.|.|..|.|:.|:.|.::|||....:.||:.|.|
  Rat   187 KKATSKAAEEGQKAGELSLKLEKEKSRASKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRA 251

  Fly   338 KLAKEELRVKELEQELNALRSEHEALKKQQQLGGSGSSVAAAKARQFSDDACATPPM-VNI---A 398
            ||.:||.|.:.|::|:.:|:...:.|:..||  .|.||....:....|......||| |::   .
  Rat   252 KLNREENRTRALKEEMESLKKLVKDLEAAQQ--HSNSSEQGREPVTTSRGTATEPPMRVSVFCQT 314

  Fly   399 KIVQPTATVSSMPVSGPQTGIARSIAPGQNIRSAGIATAPTGTATAAIAPLTAVLNHTTTITTTT 463
            :.:|...:.||:......||:     ||.       ::||        .|......|....|.||
  Rat   315 ESIQTERSHSSIMTKLTDTGL-----PGP-------SSAP--------YPYAKANGHCDPETQTT 359

  Fly   464 NNTTTSSNSNSSG-----------------------------------SIGVAATAAAVAASVET 493
            ...|:.|::.:.|                                   |.|.:.:.::.|:|..|
  Rat   360 RELTSDSSTENQGPPREKSAVPAQEKPMENGGCPVGTEIPVTMPSHLPSSGSSLSPSSTASSSLT 424

  Fly   494 AATVTVPMV-----------------------------------------------APPSP--SP 509
            ::..:.|::                                               :|||.  ||
  Rat   425 SSPCSSPVLTKRLLGSSVSSPGYQSSYQVGVNQRFHAARHRFQSQADQDQQASGLQSPPSRDLSP 489

  Fly   510 AKMQPTATIQRAP--------------------------GGKYAALAAAAALDQTTTPHPHPVPI 548
            ..:..:|..|.|.                          |..|..|.:.|.....|:..|.|..:
  Rat   490 TLLDNSAAKQLARNTVTQVLSRFTNQGPIKPVSPNSSPFGTDYRNLVSTANPRGDTSHSPTPGKV 554

  Fly   549 AVP--PV-------TVPPAGARGAPPPI-PTKPIVPPKREPSLSRLGSITGSSAIAAATAATTAA 603
            :.|  |:       |:|.| .||.|||| |.||.:.|.:  |::..|:.|.|.|.:..|....|:
  Rat   555 SSPLSPLSPGIKSPTIPRA-ERGNPPPIPPKKPGLTPSQ--SVATPGTKTHSQASSLTTTEDLAS 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NausNP_001286565.1 CortBP2 78..274 CDD:286770 67/195 (34%)
Angiomotin_C 189..381 CDD:289044 76/191 (40%)
Cttnbp2nlNP_001101182.2 CortBP2 5..188 CDD:401608 67/195 (34%)
SMC_prok_B <100..>287 CDD:274008 76/199 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335883
Domainoid 1 1.000 106 1.000 Domainoid score I6447
eggNOG 1 0.900 - - E1_KOG1103
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 169 1.000 Inparanoid score I4055
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006973
OrthoInspector 1 1.000 - - otm46131
orthoMCL 1 0.900 - - OOG6_109427
Panther 1 1.100 - - O PTHR23166
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.750

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