DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10914 and Gnl2

DIOPT Version :10

Sequence 1:NP_611297.3 Gene:CG10914 / 37075 FlyBaseID:FBgn0034307 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_001020907.1 Gene:Gnl2 / 362593 RGDID:1305006 Length:734 Species:Rattus norvegicus


Alignment Length:417 Identity:91/417 - (21%)
Similarity:141/417 - (33%) Gaps:140/417 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 KRPVFLVGNKVDLLP------------RDSNIYLQHIKDSLQREFIKHGGGNGLNIKNVSLISAK 257
            |..:|:: ||.||:|            :|......|.  ||...|     |.|..|         
  Rat   248 KHLIFVL-NKCDLVPTWATKRWVAVLSKDYPTLAFHA--SLTNPF-----GKGAFI--------- 295

  Fly   258 TGYGIEELITQLHKTWAYKGDVYL--VGCTNVGKSSLFNILLNSDYCR--PEASDLVRKATTCPW 318
                  :|:.|..|....|..:.:  :|..||||||:.|.|.:...|.  |.|.:      |..|
  Rat   296 ------QLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGE------TKVW 348

  Fly   319 PGTTLKLLRFPILRPSNDRVYQRFKRLVSERSE-----KAEMEKER-RAVARETGSAAAAQPVAP 377
            ...||....|.|..|.  .||.      ||.||     |..::.|: :|.....|:.........
  Rat   349 QYITLMRRIFLIDCPG--VVYP------SEDSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEY 405

  Fly   378 VGRTF--DRRENLHDAF---------AMAGGSRPITT-----LNDRGKEYKEARWVY-------D 419
            :.:|:  :..||..|..         .:.||...:.|     |||    ::..|..:       :
  Rat   406 ISKTYKIESWENAEDFLEKLALRTGKLLKGGEPDLLTVSKMVLND----WQRGRIPFFVKPPNAE 466

  Fly   420 TPGVMQPDQISPLLTAEELVKLQPA------------TMI--RPRAFRLRPQMSILLGGLARLDL 470
            .|...|....|||....|..:..|.            ::|  .|.|...:.:.|.:...|||:  
  Rat   467 MPTTPQLPPSSPLEVTTETTQNNPEEETIETEVERSDSVIEKEPEAGCSQDENSEMQQILARV-- 529

  Fly   471 LEITSPRKHFDWLKV--------FVFASEHLPIMIADTQEAESVYKRYVGSPFLGVPFASENLEA 527
                  |::|..:.|        .|...:.:|:.::|.::.||                ||..|.
  Rat   530 ------RQNFGKINVGPQFSADDLVPVDDLVPVDLSDLEDLES----------------SEEEEE 572

  Fly   528 RLRRWPGLQCKDGDIVLASEGRNEETR 554
            :.:..||   :|     |.|..:.:||
  Rat   573 QEQEQPG---ED-----AEEECSRDTR 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10914NP_611297.3 GTPase_YqeH 109..596 CDD:213834 91/417 (22%)
YqeH 145..332 CDD:206748 37/142 (26%)
Gnl2NP_001020907.1 NGP1NT 43..174 CDD:462379
NGP_1 209..365 CDD:206751 38/147 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.