DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10914 and gnl3

DIOPT Version :9

Sequence 1:NP_611297.3 Gene:CG10914 / 37075 FlyBaseID:FBgn0034307 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_001002297.1 Gene:gnl3 / 321897 ZFINID:ZDB-GENE-030131-616 Length:561 Species:Danio rerio


Alignment Length:357 Identity:73/357 - (20%)
Similarity:125/357 - (35%) Gaps:108/357 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LPGYIP--SEIFRDRTQ--QELQTI--------------------------------TCKRCHFL 151
            :|...|  .|:.|:..|  |||:|:                                ..|:...:
Zfish    51 VPNSAPFKEEVLREAEQRKQELETLKEQNKIVKQQEKAAKRKKEKDAASSVKEPAAKKAKKAAKI 115

  Fly   152 NHYNIALDVVVAPSTY----VDTISRIQDKFALAIVLVDLLD----FPCSIWPGMQNIL----GA 204
            .....|:..|.:..|:    ::.:....|      |:|::||    ..|.. |.::.::    |.
Zfish   116 KEARAAIVKVKSAKTFKCQELNKVIEASD------VIVEVLDARDPLGCRC-PQLEEMVLKHEGK 173

  Fly   205 KRPVFLVGNKVDLLPRDSNI-----YLQ------------HIKDSLQREFIKHGGGNGLNIKNVS 252
            |:.:|:: ||:||:|:| |:     :|:            .:||...::..:..|.|.:    :.
Zfish   174 KKLLFIL-NKIDLVPKD-NLEKWLHFLEAECPTFLFKSSMQLKDRTVQQKRQQRGTNAV----LD 232

  Fly   253 LISAKTGYGIEELITQLHKTWAYK-GDVYL----VGCTNVGKSSLFNILLNSDYCRP-------- 304
            ...|.:.:|.:.|:..|:.....| |:..|    ||..||||||:.|.|.....|..        
Zfish   233 HSRAASCFGKDFLLQTLNDLANKKEGETMLKVGVVGFPNVGKSSIINSLKEMRACNAGVQRGLTR 297

  Fly   305 --EASDLVRKATTCPWPGTTLKLLRFPILRPSNDRVYQRFKRLVSERSEKAEMEKERRAVARETG 367
              :...:.:|......||....|        ||.......:.|..|..|::..|..|..:.:...
Zfish   298 CMQEVHITKKVKMIDSPGILAAL--------SNPGSAMALRSLQVEEKEESPQEAVRNLLKQCNQ 354

  Fly   368 SAAAAQPVAPVGRTFDRRENLH--DAFAMAGG 397
            .....|...|     |.|.:|.  ..|||..|
Zfish   355 QHVMLQYNVP-----DYRSSLEFLTTFAMKHG 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10914NP_611297.3 GTPase_YqeH 109..596 CDD:213834 73/357 (20%)
YqeH 145..332 CDD:206748 48/230 (21%)
gnl3NP_001002297.1 GN3L_Grn1 17..85 CDD:285863 9/33 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..58 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..110 0/33 (0%)
GTPase_YlqF 128..411 CDD:274669 61/280 (22%)
Nucleostemin_like 144..316 CDD:206753 42/184 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 486..532
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573390
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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