DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10914 and Ns3

DIOPT Version :10

Sequence 1:NP_611297.3 Gene:CG10914 / 37075 FlyBaseID:FBgn0034307 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_569915.1 Gene:Ns3 / 31097 FlyBaseID:FBgn0266284 Length:606 Species:Drosophila melanogaster


Alignment Length:189 Identity:39/189 - (20%)
Similarity:61/189 - (32%) Gaps:74/189 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 TQLHKTWAYKGDVYLVGCTNVGKSSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLRFPIL 331
            |:.|.|      |.:||..||||||..|.|:.           |:|.:....||.|         
  Fly   334 TEQHVT------VGMVGYPNVGKSSTINSLMT-----------VKKVSVSATPGKT--------- 372

  Fly   332 RPSNDRVYQRFKRLVSERS----------------EKAEM----------------------EKE 358
                    :||:.|..::.                .||:|                      |:.
  Fly   373 --------KRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHVPAVNLLCERI 429

  Fly   359 RRAVARETGSAAAAQPVAPVGRTFDRRENLHDAFAMAGGSRPITTLNDRGKEYKEARWV 417
            .|.|..:......|:|:.  |...:|..:..:.....|.:|...|.|.:..:.:.||:|
  Fly   430 PRHVLEDKYGIVIAKPLE--GEDMERPPHSEELLLAYGYNRGFMTSNGQPDQARSARYV 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10914NP_611297.3 GTPase_YqeH 109..596 CDD:213834 39/189 (21%)
YqeH 145..332 CDD:206748 19/64 (30%)
Ns3NP_569915.1 HSR1_MMR1 164..395 CDD:206750 22/94 (23%)
RbgA 176..495 CDD:440775 39/189 (21%)

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