DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10914 and Lsg1

DIOPT Version :9

Sequence 1:NP_611297.3 Gene:CG10914 / 37075 FlyBaseID:FBgn0034307 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_001013439.1 Gene:Lsg1 / 288029 RGDID:1309089 Length:655 Species:Rattus norvegicus


Alignment Length:62 Identity:20/62 - (32%)
Similarity:26/62 - (41%) Gaps:14/62 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 ELITQLHKTWAYKG---DVYLVGCTNVGKSSLFNILLNSDYCRPEASDLVRKATTCPWPGTT 322
            ||..:||.....|.   .|.|||..||||||..|.::.:           :|.:....||.|
  Rat   368 ELFKKLHTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGN-----------KKVSVSATPGHT 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10914NP_611297.3 GTPase_YqeH 109..596 CDD:213834 20/62 (32%)
YqeH 145..332 CDD:206748 20/62 (32%)
Lsg1NP_001013439.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
RbgA 151..551 CDD:224083 20/62 (32%)
HSR1_MMR1 163..441 CDD:206750 20/62 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..359
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 625..655
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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