DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10914 and GNL1

DIOPT Version :10

Sequence 1:NP_611297.3 Gene:CG10914 / 37075 FlyBaseID:FBgn0034307 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_005266.2 Gene:GNL1 / 2794 HGNCID:4413 Length:607 Species:Homo sapiens


Alignment Length:247 Identity:52/247 - (21%)
Similarity:80/247 - (32%) Gaps:93/247 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 RIQDKFALAIVLVDL----LDFPCSIWPGMQNILGAKRPVFLVGNKVDLLPRD-----SNIYLQH 228
            |:.:...:.:::.|:    ::||.:::..:...||.  .:.||.|||||.|..     .:.:.||
Human   183 RVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGL--ALVLVLNKVDLAPPALVVAWKHYFHQH 245

  Fly   229 I--------------------KDSLQREFIKHGGG--------------NGLNIKNVSLISAK-- 257
            .                    ..|:.::..:.|.|              ..:.:..|.|.|.:  
Human   246 YPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVGKVDLSSWREK 310

  Fly   258 -----------TGYGIEE--------LITQ-----LHKTW----AYKGDVYLVGCT---NVGKSS 291
                       .|.|.||        |:.|     :..|.    .||..|..:||.   ||||||
Human   311 IARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGVVTIGCVGFPNVGKSS 375

  Fly   292 LFNILLNSDYCRPEASD----------LVRKATTCPWPGTTLKLLRFPILRP 333
            |.|.|:.........:.          |......|..||     |.||.|.|
Human   376 LINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPG-----LIFPSLLP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10914NP_611297.3 GTPase_YqeH 109..596 CDD:213834 52/247 (21%)
YqeH 145..332 CDD:206748 50/244 (20%)
GNL1NP_005266.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..81
RbgA 173..514 CDD:440775 52/247 (21%)
HSR1_MMR1 177..418 CDD:206750 48/241 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 547..607
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.