DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10914 and Gnl2

DIOPT Version :9

Sequence 1:NP_611297.3 Gene:CG10914 / 37075 FlyBaseID:FBgn0034307 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_663527.2 Gene:Gnl2 / 230737 MGIID:2385207 Length:728 Species:Mus musculus


Alignment Length:395 Identity:88/395 - (22%)
Similarity:140/395 - (35%) Gaps:108/395 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 RIQDKFALAIVLVDLLDFPCSIWPGMQNILGAKRP---VFLVGNKVDLLP------------RDS 222
            ::.|...:.:.::|..|...:..|.::..|..::|   :..|.||.||:|            :|.
Mouse   212 KVIDSSDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDY 276

  Fly   223 NIYLQHIKDSLQREFIKHGGGNGLNIKNVSLISAKTGYGIEELITQLHKTWAYKGDVYL--VGCT 285
            .....|.  ||...|     |.|..|               :|:.|..|....|..:.:  :|..
Mouse   277 PTLAFHA--SLTNPF-----GKGAFI---------------QLLRQFGKLHTDKKQISVGFIGYP 319

  Fly   286 NVGKSSLFNILLNSDYCR--PEASDLVRKATTCPWPGTTLKLLRFPILRPSNDRVYQRFKRLVSE 348
            ||||||:.|.|.:...|.  |.|.:      |..|...||....|.|..|.  .||.      ||
Mouse   320 NVGKSSVINTLRSKKVCNVAPIAGE------TKVWQYITLMRRIFLIDCPG--VVYP------SE 370

  Fly   349 RSE-----KAEMEKER-RAVARETGSAAAAQPVAPVGRTF--DRRENLHDAF---------AMAG 396
            .||     |..::.|: :|.....|:.........:.:|:  :..||..|..         .:.|
Mouse   371 DSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEYISKTYKIESWENAEDFLEKLALRTGKLLKG 435

  Fly   397 GSRPITT-----LND--RGK---EYKEARWVYDTPGVMQPDQISPL--------------LTAEE 437
            |...:.|     |||  ||:   ..|.......|...:.|.  |||              .|..|
Mouse   436 GEPDMLTVSKMVLNDWQRGRIPFFVKPPNAELPTDSQLPPS--SPLEVPTETTQNNPEEETTETE 498

  Fly   438 LVKLQPATMIRPRAFRLRPQMSILLGGLARLDLLEITSPRKHFDWLKVF-VFASEHL-PIMIADT 500
            :.:....|...|.....:.:.|.:...|||:        |::|..:.|. .|:::.| |:.::|.
Mouse   499 VERSDSITEKEPEGDCSQDRNSEMQQILARV--------RQNFGKINVGPQFSADDLVPVEMSDL 555

  Fly   501 QEAES 505
            ::.||
Mouse   556 EDLES 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10914NP_611297.3 GTPase_YqeH 109..596 CDD:213834 88/395 (22%)
YqeH 145..332 CDD:206748 42/177 (24%)
Gnl2NP_663527.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
NGP1NT 43..174 CDD:400461
NGP_1 209..365 CDD:206751 43/182 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 462..521 9/60 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 538..595 7/23 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 636..728
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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