DRSC/TRiP Functional Genomics Resources

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Protein Alignment adp and Wdtc1

DIOPT Version :9

Sequence 1:NP_001286563.1 Gene:adp / 37073 FlyBaseID:FBgn0000057 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001101378.1 Gene:Wdtc1 / 313020 RGDID:1310362 Length:676 Species:Rattus norvegicus


Alignment Length:635 Identity:236/635 - (37%)
Similarity:322/635 - (50%) Gaps:81/635 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RRLLASPAYVDRLEQEAVLVGHEGCVNCLEWTTDGMWLASGSDDYRVMIWDPFRKKLVHVIRTKH 109
            ||...:..::.||..||.|.||.||||||||...|..|||||||...::|||...|.:..:.|.|
  Rat    25 RRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGH 89

  Fly   110 LGNVFSVKFLPKTNNSIVATCAADKFIYVYDINDPNETLFSCICHFSRAKRLATAQDSPHVFWSA 174
            ..|:|||||||...:.|:.|.|||..::|:|:. ..||:.....|.:|.||:|||...|:.||||
  Rat    90 TANIFSVKFLPHAGDRILITGAADSKVHVHDLT-VKETIHMFGDHTNRVKRIATAPMWPNTFWSA 153

  Fly   175 GEDGCILQLDIREPHR-----------CRPEEGIGVRLLNLHDQLENTEAKCLAINPRRTEYLAV 228
            .|||.|.|.|:||..:           |.|                ..|||||.:||:....|||
  Rat   154 AEDGLIRQYDLRENSKHSEVLIDLTEYCGP----------------MVEAKCLTVNPQDNNCLAV 202

  Fly   229 GTNDPFARVYD-------RRKLPSTNGNGL-----------SACVAYYAPGQI-VKNISRNIVHE 274
            |.:.||.|:||       |:.:..:...|:           .....||..|.: ||....|....
  Rat   203 GASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNSRLR 267

  Fly   275 PRGITYLTFNGNGTELLVNIGCEHVYRFDLNHAEPPVFYDLP--------------------AFT 319
            ....||:||:.||||||||:|.|.||.|||.:.:.|..:.||                    ..:
  Rat   268 VLVATYVTFSPNGTELLVNMGGEQVYLFDLTYKQRPYTFLLPRKCHSVEVQNGKMSTNGVSNGVS 332

  Fly   320 STLVHEEEPVKMPHRSR------SLPTEIEVYKKEGNDFLENGKLVDAIDAYSAALAKYPQGEVL 378
            :.|.......::|....      .||..:|..|::.|:.....:...||..||.|:.|.|...:|
  Rat   333 NGLHLHSNGFRLPESKGCISPQVELPPYLERVKQQANEAFACQQWTQAIQLYSKAVQKAPHNAML 397

  Fly   379 YLNRATALMRRGWFGDIYAALRDCHEALRLDPSYVKAHFRLARALLELHRPQDADQCLQALIQRF 443
            |.|||.|.|:|.|.||.|.|||||.:|:.|:|.::||||||||.|.||....:|.:||.....:|
  Rat   398 YGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKF 462

  Fly   444 PDFANNHGVLMLNKDI------KENRRQSKSPEAPELQPVEVDDGFRYLRLKNAEYDLRSTARDY 502
            |:.|::.....|.:||      |.:..:.|:  |....||.:....|...:...|..||..:.||
  Rat   463 PEQAHSSACDALGRDITAALFSKSDGEEKKA--AGGGGPVRLRSTSRKDSISEDEMVLRERSYDY 525

  Fly   503 MQRYVGHCNVTTDIKEANYLGSQGEFIAAGSDDGNMYIWEGDTGKIRAVYRADSAIVNCVQPHPS 567
            ..||.||||.||||||||:.||..::|.:|||||:.:|||.:|..:..|.:.|.:||||:|||||
  Rat   526 QFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPS 590

  Fly   568 ICMLATSGIDHNIKIWSPCAASAEERPNLVADVTRFVEDNQEKMRLDPFE 617
            .|.|||||||..:::|:|...|.:....:|.|:....:.||.:|..:|.|
  Rat   591 YCFLATSGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNANPLE 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
adpNP_001286563.1 WD40 54..>242 CDD:295369 85/205 (41%)
WD40 59..>242 CDD:225201 83/200 (42%)
WD40 repeat 72..108 CDD:293791 16/35 (46%)
WD40 repeat 114..154 CDD:293791 16/39 (41%)
WD40 repeat 158..203 CDD:293791 20/55 (36%)
WD40 repeat 214..268 CDD:293791 21/72 (29%)
TPR_11 341..410 CDD:290150 29/68 (43%)
TPR repeat 342..370 CDD:276809 8/27 (30%)
TPR repeat 375..408 CDD:276809 18/32 (56%)
TPR_11 378..444 CDD:290150 34/65 (52%)
TPR repeat 413..441 CDD:276809 14/27 (52%)
TPR_6 415..445 CDD:289917 14/29 (48%)
WD40 repeat 513..553 CDD:293791 21/39 (54%)
WD40 <524..>584 CDD:225201 30/59 (51%)
WD40 <526..584 CDD:295369 29/57 (51%)
Wdtc1NP_001101378.1 WD40 <34..163 CDD:421866 63/129 (49%)
WD40 repeat 51..88 CDD:293791 17/36 (47%)
WD40 repeat 93..131 CDD:293791 16/38 (42%)
WD40 repeat 138..178 CDD:293791 18/39 (46%)
WD40 repeat 232..271 CDD:293791 6/38 (16%)
TPR repeat 365..389 CDD:276809 7/23 (30%)
PLN03088 367..>437 CDD:215568 31/69 (45%)
TPR repeat 394..427 CDD:276809 18/32 (56%)
TPR repeat 432..456 CDD:276809 13/23 (57%)
WD40 repeat 536..576 CDD:293791 21/39 (54%)
WD40 <545..>625 CDD:421866 36/79 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340322
Domainoid 1 1.000 150 1.000 Domainoid score I4295
eggNOG 1 0.900 - - E1_KOG1334
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8997
Inparanoid 1 1.050 379 1.000 Inparanoid score I1995
OMA 1 1.010 - - QHG55803
OrthoDB 1 1.010 - - D1270484at2759
OrthoFinder 1 1.000 - - FOG0005181
OrthoInspector 1 1.000 - - oto96985
orthoMCL 1 0.900 - - OOG6_104422
Panther 1 1.100 - - LDO PTHR15574
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4797
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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