DRSC/TRiP Functional Genomics Resources

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Protein Alignment adp and R11D1.1

DIOPT Version :9

Sequence 1:NP_001286563.1 Gene:adp / 37073 FlyBaseID:FBgn0000057 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_506171.2 Gene:R11D1.1 / 179738 WormBaseID:WBGene00011242 Length:622 Species:Caenorhabditis elegans


Alignment Length:584 Identity:115/584 - (19%)
Similarity:195/584 - (33%) Gaps:186/584 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 HEGCVNCLEWTTDGMWLASGSDDYRVMIWD----PFRK--KLVHVIRTKHLGNVFSVKF------ 118
            |.||:|.|:::.:..:||||.||....:|:    ..||  |.:.|:...|..|:||::|      
 Worm    65 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRF 129

  Fly   119 --------------------------------------LPKTNNSIVATCAADKFIYVYDINDPN 145
                                                  .|..|..||.|.|  |.:...| |...
 Worm   130 LYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRA--KLVSFID-NRDR 191

  Fly   146 ETLFSCICHFSRAKRLATAQ---DSPHVFWSAGEDGCILQLDIREPHRCRPEEGIGVRLLNLHDQ 207
            :...|.:...:..|...||:   ::|.:.....|.|.....|.|  .:.||     |...::...
 Worm   192 QNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRR--MQARP-----VYQRSMFKG 249

  Fly   208 L--ENTEAKCLAINPRRTEYLAVGTNDPFARVYDRRKLPSTNGNGLSACVAYYAPGQIVKNISRN 270
            |  ||||......:|...:::::           ||          ..|..|:      ..||:.
 Worm   250 LPQENTEWMGSLWSPSGNQFMSI-----------RR----------GKCPLYF------DFISQR 287

  Fly   271 IV-----HEPRG------ITYLTFNGNGTELLVNIGCEH--VYRFDLNHAEPPVFYDLPAFTSTL 322
            ..     |.|.|      |..:||..:.|   |..|.:|  ::.:.|..|.     |...||. :
 Worm   288 CFVLKSDHNPNGYCNIKTIKSMTFIDDYT---VATGSDHWGIHIWKLPRAN-----DSYGFTQ-I 343

  Fly   323 VHEEEPVKMPHR------------SRSLPTEIEVYKKEGNDFLENGKLVDAID---------AYS 366
            .|:||  :||..            .||:|.::..  .:.|:.|.:..:.::..         :|.
 Worm   344 GHDEE--EMPSEIFIEKELTVLRGHRSVPNQVRF--SQHNNLLVSSGVENSFKLWSDHRLPWSYD 404

  Fly   367 AALAKYPQGEVLYLNRATALMRRGWFGDIYA---ALRDCHEALRLDPSYVKAHFRLARALLELHR 428
            ....:.|.|..                |:.|   .||:..|.            |:....|:|:.
 Worm   405 LPFERRPHGTY----------------DLSAEEECLREMEER------------RVVEDALDLNG 441

  Fly   429 PQDADQCLQALIQRFPDFANNHGVLML-----NKDIKENRRQSKSPEAPELQPVEVDDGFRYLRL 488
            ..|...|.:.:.......|.:...|.:     :.|.:|:..:|.|.::.::...|.||. .|.|.
 Worm   442 EMDGRACWRDIFGGDARTAEDRDTLEMFDPRGHGDDEEDVEESSSEDSDDMMDNEADDN-HYFRR 505

  Fly   489 KNAEYD----LRSTARDYMQRYV-GHCNVTTDIKEANYLGSQGEFIAAGSDDGNMYIWEGDTGK 547
            :.....    |:....:::.|.: .|..|..|:.| .....:..|....||:.:    .||.|:
 Worm   506 RRGPLQLFVLLQRAGEEHLARMLEEHDGVENDLLE-ELFNMRRRFREESSDEDD----SGDDGE 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
adpNP_001286563.1 WD40 54..>242 CDD:295369 49/230 (21%)
WD40 59..>242 CDD:225201 49/230 (21%)
WD40 repeat 72..108 CDD:293791 12/41 (29%)
WD40 repeat 114..154 CDD:293791 13/83 (16%)
WD40 repeat 158..203 CDD:293791 11/47 (23%)
WD40 repeat 214..268 CDD:293791 5/53 (9%)
TPR_11 341..410 CDD:290150 10/80 (13%)
TPR repeat 342..370 CDD:276809 3/36 (8%)
TPR repeat 375..408 CDD:276809 6/35 (17%)
TPR_11 378..444 CDD:290150 10/68 (15%)
TPR repeat 413..441 CDD:276809 5/27 (19%)
TPR_6 415..445 CDD:289917 5/29 (17%)
WD40 repeat 513..553 CDD:293791 8/35 (23%)
WD40 <524..>584 CDD:225201 6/24 (25%)
WD40 <526..584 CDD:295369 6/22 (27%)
R11D1.1NP_506171.2 WD40 39..399 CDD:225201 79/383 (21%)
WD40 58..395 CDD:295369 79/379 (21%)
WD40 repeat 69..111 CDD:293791 13/41 (32%)
WD40 repeat 118..152 CDD:293791 3/33 (9%)
WD40 repeat 230..293 CDD:293791 17/96 (18%)
WD40 repeat 306..343 CDD:293791 12/45 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270484at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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