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Protein Alignment EMRE and Smdt1
DIOPT Version :10
| Sequence 1: | NP_611294.1 |
Gene: | EMRE / 37071 |
FlyBaseID: | FBgn0062440 |
Length: | 97 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001386665.1 |
Gene: | Smdt1 / 315166 |
RGDID: | 1311310 |
Length: | 107 |
Species: | Rattus norvegicus |
| Alignment Length: | 89 |
Identity: | 43/89 - (48%) |
| Similarity: | 52/89 - (58%) |
Gaps: | 15/89 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 LPISLALQRVSRRVAEHPHNLRILQRHMSSVYFRSGAIKPKPEEMPFGLLAIFCAVIPGLFVGAT 72
:|.|..|.:|..| |.:..|||||.|||.:|.||||.:|..|||.|:||..
Rat 34 VPGSSGLSQVPSR---------------SVIVTRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTL 83
Fly 73 ISKNVANFLEENDLFVPADDDDDE 96
||||.|..|||:|:|||.|||||:
Rat 84 ISKNFAALLEEHDIFVPEDDDDDD 107
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| EMRE | NP_611294.1 |
DDDD |
22..90 |
CDD:431099 |
32/67 (48%) |
| Smdt1 | NP_001386665.1 |
DDDD |
35..101 |
CDD:431099 |
37/80 (46%) |
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