Protein Alignment pAbp and RIE1

DIOPT Version :9

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_011766.3
• Gene: RIE1 / 853165
• SGDID: S000003482
• Length: 781
• Species: Saccharomyces cerevisiae
• Alignment Length: 620
• Identity: 128/620 - (20%)
• Similarity: 207/620 - (33%)
• Gaps: 250/620 - (40%)

  Fly    50 FQQPADAERALDTMNFDLVRNKPIR---IMWSQRDPSLRRSGV--------GNVFIKNLDRAIDN 103
            |:.|...|.|...:: :|::::||.   ..||        .||        ||:|:..:.:::..
Yeast   153 FKYPKSLENACTDIS-ELLKSEPIGQHIDKWS--------IGVNKHALTYPGNIFVGGIAKSLSI 208

  Fly   104 KAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIP 167
            ..:...||.:|.|||.|:..|: ||...||||:.:.....|:..|.::||..:||..:::...:.
Yeast   209 GELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVNGSTLFINYHVE 273

  Fly   168 RKERE-------KE-----------LG-------EKAK-LFT-----NVYVKNFTEDFDDEKLKE 201
            |||||       ||           :|       ||.: |.|     .|..|..::.|.|..:..
Yeast   274 RKERERIHWDHVKENNNDDNFRCLFIGNLPYHNPEKVETLITPKEVIEVIKKELSKKFPDFDIIS 338

  Fly   202 FFEP---------------YGKITSYKVMSKEDGKS------KGFGFVAFETTEAAEAAVQALNG 245
            ::.|               .|.:.|.|..:..:|.:      ||:||:.....|.|.||::..||
Yeast   339 YYFPKRSNTRSSSSVSFNEEGSVESNKSSNNTNGNAQDEDMLKGYGFIKLINHEQALAAIETFNG 403

  Fly   246 KDMGEGKSLYVARA-QKK----------------------------------------------- 262
             .|..|..|.|.:| |.|
Yeast   404 -FMWHGNRLVVNKAVQHKVYNNHNSHDRHPSISNHNDMEVLEFANNPMYDYNNYTYDRYYFNNNK 467

  Fly   263 ---------------------AERQQ---ELKRKFEELKQKRHESVFG----------------- 286
                                 ||:..   ..:..|.|.:.:|.....|
Yeast   468 NGNSNDTSNVRYFDSVRSTPVAEKMDLFYPQRESFSEGRGQRVPRFMGNKFDMYQYPSTSYSLPI 532

  Fly   287 -------VNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMT-----------------DEE---G 324
                   .|||||::..:..|:.|...:..:|.|.|.||:|                 |.:   |
Yeast   533 PMSNQQESNLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVG 597

  Fly   325 RSKGFGFVCFNAASEATCAVTELNG-RVVGSKPLYVALAQRK----------------------- 365
            .|:|:|||.|.:..:|..|:...:| :|...:.|.|:.||::
Yeast   598 SSRGYGFVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKRGNLSSSDDDDQSQTDNSSKFQNF 662

  Fly   366 ----EERKAHLASQYMRHMTGMRMQQLGQIYQPNAASGFFVP-------TLPSNQRFFGSQVATQ 419
                :..||: .::|.:......|.| .|..|..:...:|:|       |.|.|    ...:.:.
Yeast   663 QPHNDYHKAY-PTKYNKKFINALMTQ-NQSQQQVSRENYFIPLQYPNTNTKPVN----SYNLISA 721

  Fly   420 MRNTPRW----------VPQVRP---------PAA 435
            .:|...|          :|||.|         |||
Yeast   722 NQNNANWMMPMFPSFGFIPQVPPVPYIIPPQNPAA 756

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	128/620 (21%)
RIE1	NP_011766.3	PABP-1234	195..757	CDD:130689	117/569 (21%)
		RRM3_CELF1-6	542..634	CDD:409797	25/91 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910