Protein Alignment pAbp and PAB5

DIOPT Version :9

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_001185373.1
• Gene: PAB5 / 843507
• AraportID: AT1G71770
• Length: 682
• Species: Arabidopsis thaliana
• Alignment Length: 665
• Identity: 292/665 - (43%)
• Similarity: 398/665 - (59%)
• Gaps: 89/665 - (13%)

  Fly     2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFD 66
            :|||||||...||||.|.|.|:...||.::||||| :|.||||||||||..|.||.||::::|:.
plant    59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMESLNYA 122

  Fly    67 LVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKG 131
            .:|::|||||.|.||||.|.||.|||||||||.:|||||:|:|||:||.|||||||.|..|.|||
plant   123 PIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKG 187

  Fly   132 YGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDD 196
            ||||.||.||.|..:|||:||||||.|:|:||.|:.|::|.:........||||||||..::..|
plant   188 YGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITD 252

  Fly   197 EKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQK 261
            ::||:.|..||.|:|..||..:.|.|:.||||.|.:.|||..||:.:||..:|| ..|||.||||
plant   253 DELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGE-DVLYVGRAQK 316

  Fly   262 KAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRS 326
            |::|::||:||||:.:..|.|.:.|.|||:|||||:::|::|:..||.|||:||.|||.:.:|.|
plant   317 KSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLS 381

  Fly   327 KGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQI 391
            :|||||.::...||..|:.|:||:::|.||||||||||||||:|||.|.:.:..:...|..:
plant   382 RGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPV--- 443

  Fly   392 YQPNAASGF----------------FV-----PTLPSNQRFFGSQVATQMRNTPRWVPQVRP--- 432
              |:..|||                |:     ..:||....:|.||        :::|.:||
plant   444 --PSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQV--------QFMPGMRPGAG 498

  Fly   433 ------PAAIQ-GVQAGAAAAGGFQGTAGAVPTQFRSAAAGARGAQPQV--QGTHAAAAAANNMR 488
                  |..:| ..|.|...  ||:..|..:..||:         |.|:  |........|.|.|
plant   499 PPNFMMPFPLQRQTQPGPRV--GFRRGANNMQQQFQ---------QQQMLQQNASRFMGGAGNRR 552

  Fly   489 NTGARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGKNSE 553
            |       |.:.:||...||....|            ::|..|.| .:.|:..|:        :.
plant   553 N-------GMEASAPQGIIPLPLNA------------SANSHNAP-QRSHKPTPL--------TI 589

  Fly   554 KLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVE 618
            ..:||.||.|.|.:..::||:.|||::|......|.|:||||||::.:|:||::|..|||||||.
plant   590 SKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVS 654

  Fly   619 EAVAVLQVHRVTEPA 633
            ||:.||:  |..:||
plant   655 EALDVLR--RSADPA 667

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	288/655 (44%)
PAB5	NP_001185373.1	PABP-1234	59..661	CDD:130689	288/655 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	103	1.000	Domainoid score	I2252
eggNOG	1	0.900	-	-		E1_KOG0123
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H37855
Inparanoid	1	1.050	490	1.000	Inparanoid score	I329
OMA	1	1.010	-	-		QHG53624
OrthoDB	1	1.010	-	-		D1027234at2759
OrthoFinder	1	1.000	-	-		FOG0000294
OrthoInspector	1	1.000	-	-		otm2763
orthoMCL	1	0.900	-	-		OOG6_100425
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X269
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.840