Protein Alignment pAbp and PAB1

DIOPT Version :10

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_174676.2
• Gene: PAB1 / 840313
• AraportID: AT1G34140
• Length: 407
• Species: Arabidopsis thaliana
• Alignment Length: 399
• Identity: 168/399 - (42%)
• Similarity: 244/399 - (61%)
• Gaps: 31/399 - (7%)

  Fly    60 LDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD 124
            ::.:|:..::.||:|||:|:||||.|.||.||||:||||.:||||.:.|.|||||.:||||||.|
plant     1 MEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARD 65

  Fly   125 EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKN 189
            ..|.|||||||.|.::.:..|:.:..||.|:..:.::|..|:.|.:     .:|:::||||||||
plant    66 ASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQ-----WDKSRVFTNVYVKN 125

  Fly   190 FTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSL 254
            ..|...|..||..|..:|:|||..||...:|||:.||||.||..|||..|::.:||..:.| |.|
plant   126 LVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDE-KEL 189

  Fly   255 YVARAQKKAERQQELKRKFE------ELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNI 313
            :|.|||:|..|.::||.|||      ::|.::     |:|||||||||::|:.:|...||.:|.|
plant   190 HVGRAQRKTNRTEDLKAKFELEKIIRDMKTRK-----GMNLYVKNLDDSVDNTKLEELFSEFGTI 249

  Fly   314 TSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMR 378
            ||.|||....|.|||.|||.|:.:.||:.|:.::||::||:||:||:|||.||:.|.||.:|:..
plant   250 TSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQCKEQHKLHLQTQFNN 314

  Fly   379 HMTGMRMQQL-GQIYQPNAASGFFVPTLPSNQRFFGSQVATQMRNT------PRWV------PQV 430
            .......|.: .|:..|........|....|.:.: |...::|.|:      |.::      |.:
plant   315 PPPSPHQQPIFSQVVAPATMLSQQTPLRGYNFQPY-SMCGSRMPNSCPPISIPNFMVPQPFRPTL 378

  Fly   431 RPPAAIQGV 439
            .|||.:.|:
plant   379 YPPAPLVGL 387

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	168/399 (42%)
PAB1	NP_174676.2	PABP-1234	1..405	CDD:130689	168/399 (42%)